Gene Information

Name : lolD (Atu1290)
Accession : NP_354299.2
Strain :
Genome accession: NC_003062
Putative virulence/resistance : Virulence
Product : ABC transporter, nucleotide binding/ATPase protein (lipoprotein)
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1278586 - 1279194 bp
Length : 609 bp
Strand : +
Note : -

DNA sequence : 
TTGCGCAAGGCCGATTTTGAATTGAAGAGCGGTGAGATGGTGGCGCTGGTCGCCCCATCGGGCACCGGCAAATCGACGCT
GCTGCATCTGGCGGGGCTTCTGGAGCATCCTGATGCGGGTGAGGTGCTCATCAACGGTGCGCCCTGCAACGGCCTGCCGG
ATGAAGCGCGCACCGCGATCCGCCGTAGCGATATCGGTTTCGTTTATCAGTTCCATCACCTCCTGCCGGAATTCACCGCG
GTGGAAAATGTGATGATGCCGCAGCTCATCGCCGGCCTCACGCAGGCGGAGGCACGCAAGCGGGCAAGCGCGCTGCTCGA
TTATATGCGGGTGGGCCATCGTGGTGAGCACCGTCCGGCCGAACTTTCGGGCGGTGAGCAGCAGCGTGTCGCCATTGCCC
GCGCCGTTGCCAATGCGCCGCTGCTGCTGCTGGCCGACGAGCCGACTGGCAATCTCGATCCGGAAACCGCGCATTATGTT
TTCGATGCGCTGGAGGCGCTGGTGCGTCAATCCGGCCTCGCGGCGCTGATCGCGACCCACAATCACGATCTTGCCAACCG
CATGGATCGCCGCGTGACGCTCGCCGACGGCAAGATCGTCGATTTTTAA

Protein sequence : 
MRKADFELKSGEMVALVAPSGTGKSTLLHLAGLLEHPDAGEVLINGAPCNGLPDEARTAIRRSDIGFVYQFHHLLPEFTA
VENVMMPQLIAGLTQAEARKRASALLDYMRVGHRGEHRPAELSGGEQQRVAIARAVANAPLLLLADEPTGNLDPETAHYV
FDALEALVRQSGLAALIATHNHDLANRMDRRVTLADGKIVDF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 1e-21 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lolD NP_354299.2 ABC transporter, nucleotide binding/ATPase protein (lipoprotein) NC_008702.1.4606598. Protein 4e-32 46
lolD NP_354299.2 ABC transporter, nucleotide binding/ATPase protein (lipoprotein) NC_012469.1.7685735. Protein 9e-32 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lolD NP_354299.2 ABC transporter, nucleotide binding/ATPase protein (lipoprotein) VFG2059 Protein 5e-15 42