Name : clpB (Atu4344) Accession : NP_356311.2 Strain : Genome accession: NC_003063 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease, ATP-binding subunit Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1477260 - 1479938 bp Length : 2679 bp Strand : + Note : - DNA sequence : ATGTCGCATATCGATCTCAATCGCCTCGTTGGAGCGCTTGAGCCAGACCTGCGCGTTACCCTCGAAGCTGCGGCTTCCGT TGCGGTGCGTATGGGGCACAGGTACGTGGATATACCGCATTGGCTGCTGGCGGTTGTAGATGCCGGTATCTATGCGGAAA CATTCGACGAATTAAAAATTCCACTTCCGGTATTGAAGGCTGAAATCGGCCGCAGTCTGGAAGAGGCCATTATCGGCGAC GGGGAGGCCTTGTCGCTCTCCCAGAACATCCTCACGGCAGCCCGGGAGGCATGGATTCTTGCGTCGCTGGAGGCTGGCCG TGACCGCGTGACGCTTTGCGATCTCCTGTTGGCGATGGATGAGGAAACCTCACTTCGCTCCTTTGTCCGCTCGGCATTTC CGTCTCTCAAGGCGATGGATCGCGGTGCGCTTGAGCGTCTTCGCAGCTCGGCCGAGAACGGCGCAGGCGTGGATGTTCCT TCCGCGCTGACAAGTTCAGGAGAGGCAGGCTCGGCACAGGCCGCCGGCCAGAATGATTTCTTGCGCCTTTACACCCACGA CATGACCACCGATGCCCGCAACGGCAAGGTCGATCCTGTTATCGGCCGCGATGATGAGTTGCGCCAGCTCGTTGATATTC TGACCCGCCGCCGACAGAACAATCCTATTCTGGTGGGCGAGGCCGGCGTGGGCAAGACCGCGGTCGCCGAAGCGCTGGCG TTGGAAATCGCCTCCGGCAACGTTCCGGAGAAACTGCGCAATGTCTGCCTGCTGAACCTCGATATTTCGCTGCTGCAGGC CGGTGCCGGCGTGAAAGGTGAGTTCGAGCGGCGCCTGCACGGCGTGATCGATGCGGTCAAGCGTTCGGCCGAACCGGTCA TCCTGTTCATCGATGAGGCCCATGGCCTTGTTGGCGCGGGTGGTGCGGCGGGCCAGGGTGATGCGGCGAATATTCTTAAG CCCGCACTCGCACGAGGCGAGGTGCGGACCGTCGCGGCAACGACGTGGAGTGAATACAAGAAATATTTCGAGAAGGATGC GGCGCTGACGCGTCGTTTCCAGCCAGTGCATGTGCGCGAGCCGGACGAGGCGACTGCGATACGGATGTTGCGCGGTGTGG CGGATACTTTCGTCAGCCATCACAACGTTACCGTTCGTGATGAGGCGATCGTGGCTGCCGTGCAATTATCCGCGCGCTAC ATGCCCGCTCGGCAATTGCCGGACAAGGCGGTCAGCCTGCTCGATACCGCCGCCGCGGCCGTTTCGCTGGCGCGGCAGAC GTTGCCAGAGCGGTTACGTGCCATGGAAAGCGAGCGACACCTTCTGTCTGACGAACTGAACTGGCTTCTGCGTGAACCGC AGGATGAGGACATGCAAAACCGCATCCAGTCGATACGCGACGAGCTTGAACGGCTTGAGGCCGGGATCGATGATCTGCGC GGCCGTTATGACGCGGAAATGGCTGAACTGGCGGCGCTCAGTGAAGAGCAGCCGGCCGAAACCGGCGCGTCGAATGTTTC GCACCTGCGGCCTGCCACGGAGATGCGGCCCGCAAATGCCGAAAGACTTGTTCCGACAGTGGTTGATCGTGAAGCGATCG CCGCCGTCGTCTCGCGATGGACCGGGATTCCGCTCGGCAAACTTCTGGCGGACCAGATCGAAAGCGCCCGCACTCTGGAT GTGCGCATGCGGCAGCGCGTGGTTGGGCAGGATGCCGCAATTACCCGGATTGCCGATGCCATGCGCACCGCCCGTGCCGG ATTGTCCGATCCGCGCCGTCCGCCGGCGGTGTTTTTCCTTGTCGGCATGTCCGGAACGGGCAAGACCGAAACGGCGCTGT CGCTGGCCGATCTTCTCTATGGCGGCAACAGCCATCTGACGACGATCAACATGTCGGAGTTCAAGGAGGAGCACAAGGTT TCCCTGCTTCTCGGCTCACCGCCTGGCTATGTCGGTTTCGGCGAAGGTGGGGTGCTGACGGAAGCGGTGCGCCGCCGGCC GTTCGGCGTTCTGCTTCTCGATGAAATCGACAAGGCTCACCCCGGCGTCCAGGATATTTTTTATCAGGTGTTCGACAAGG GCGTGCTTCGCGATGGCGAAGGCCGCGACGTCGATTTCAAGAACACCACGATCTTCATGACGGCCAATACCGGTTCGGAA TTGCTGTCGGCGCTTTCCGCCGATCCCGACACTATGCCGGAAGGTGAGGCGCTGGAAGCGCTTCTGATGCCGGAGCTTAC CAAACAGTTCAAGCCCGCATTCCTCGGGCGCACGATCATCCTGCCCTTCATGCCGCTTGGCGCGGAGGAGCTTGCAAGTG TCGTGGACATGCAGATTGGCAAGATCAGGGACCGTGTGCTCGCAACATATGGCACCGACCTGAGATTGTCCGATGCGGCG CGCGATGCCTTGGTGGCGCGCGCCGGTGCAAGTGAAATCGGCGCACGCGCCATCGAAATCATGATCGGCAAGGATCTCCT GCCGCCTCTTTCCAGCTTTTTCCTCGAGAAGGTCATCGCGGGAGAACGCGTCGGGAAGATCGTTGTCGATTTTGGTGAAA ACGGGTTCGGCATTCGTGCGGAAGCGGCTGGGGAAGCAGATGAATTCGCCGTAACCGAAGAGGTTGGGGTGGATAAAGTT GCCGCGTCGGATGGGGCTACCCGACGCATGCGGCATTAA Protein sequence : MSHIDLNRLVGALEPDLRVTLEAAASVAVRMGHRYVDIPHWLLAVVDAGIYAETFDELKIPLPVLKAEIGRSLEEAIIGD GEALSLSQNILTAAREAWILASLEAGRDRVTLCDLLLAMDEETSLRSFVRSAFPSLKAMDRGALERLRSSAENGAGVDVP SALTSSGEAGSAQAAGQNDFLRLYTHDMTTDARNGKVDPVIGRDDELRQLVDILTRRRQNNPILVGEAGVGKTAVAEALA LEIASGNVPEKLRNVCLLNLDISLLQAGAGVKGEFERRLHGVIDAVKRSAEPVILFIDEAHGLVGAGGAAGQGDAANILK PALARGEVRTVAATTWSEYKKYFEKDAALTRRFQPVHVREPDEATAIRMLRGVADTFVSHHNVTVRDEAIVAAVQLSARY MPARQLPDKAVSLLDTAAAAVSLARQTLPERLRAMESERHLLSDELNWLLREPQDEDMQNRIQSIRDELERLEAGIDDLR GRYDAEMAELAALSEEQPAETGASNVSHLRPATEMRPANAERLVPTVVDREAIAAVVSRWTGIPLGKLLADQIESARTLD VRMRQRVVGQDAAITRIADAMRTARAGLSDPRRPPAVFFLVGMSGTGKTETALSLADLLYGGNSHLTTINMSEFKEEHKV SLLLGSPPGYVGFGEGGVLTEAVRRRPFGVLLLDEIDKAHPGVQDIFYQVFDKGVLRDGEGRDVDFKNTTIFMTANTGSE LLSALSADPDTMPEGEALEALLMPELTKQFKPAFLGRTIILPFMPLGAEELASVVDMQIGKIRDRVLATYGTDLRLSDAA RDALVARAGASEIGARAIEIMIGKDLLPPLSSFFLEKVIAGERVGKIVVDFGENGFGIRAEAAGEADEFAVTEEVGVDKV AASDGATRRMRH |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 5e-137 | 44 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
clpB | NP_356311.2 | ATP-dependent Clp protease, ATP-binding subunit | VFG2084 | Protein | 2e-119 | 45 |