Gene Information

Name : ABC-NBD (spr0812)
Accession : NP_358406.1
Strain : Streptococcus pneumoniae R6
Genome accession: NC_003098
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 813563 - 814378 bp
Length : 816 bp
Strand : +
Note : -

DNA sequence :
ATGCACTATGATGCAAGCTACATTTCATTTGATGGGATATTAAGAAAGGAGATTCTCATGACACTTTTAGATGTAAAACA
CGTTCAAAAAATTTATAAAACACGTTTTCAGGGCAACCAAGTAGAAGCCCTCAAGGATATTCACTTTACCGTCGAAAAGG
GTGACTACGTTGCCATCATGGGTGAGTCTGGTTCTGGTAAATCAACTCTTCTCAATATTCTAGCTATGCTGGATAAACCA
AGTCGTGGTCAGGTTTACTTGAATGGAACTGACACCGCAACCATTAAAAATTCACAGGCCTCTAGCTTCCGTCGTGAAAA
GTTGGGCTTTGTCTTCCAAGACTTTAACTTGCTAGATACTCTATCTGTAAAGGACAATATCTTGCTTCCGCTTGTCTTGT
CAAGAAGACCTATTACAGAGATGATGAAGAAATTGGTGGTGACAGCTGAGAATCTGGGAATAAACCAATTACAAGAGAAG
TACCCTTACGAGATTTCTGGTGGTCAGAAACAGCGTGTAGCAGTAGCCCGCGCCATCATCACAGAACCTGAAATTCTCCT
TGCGGACGAACCGACAGGAGCTCTTGACTCCAAGTCATCTGCAGCCTTACTTGATGTCTTTGATGAAATCAATGAGCGCG
GCCAAACCATTCTCATGGTAACCCACTCAACAGCAGCAGCTAGCAGAGCTAAACGTGTACTCTTTATCAAAGACGGCATT
CTTTACAATCAAATCTACCGTGGAGAGAAGACAGAACGTCAGATGTTCCAAGAAATCTCTGATACCTTGACTGTCATGGC
AAGCGAGGTGAATTAG

Protein sequence :
MHYDASYISFDGILRKEILMTLLDVKHVQKIYKTRFQGNQVEALKDIHFTVEKGDYVAIMGESGSGKSTLLNILAMLDKP
SRGQVYLNGTDTATIKNSQASSFRREKLGFVFQDFNLLDTLSVKDNILLPLVLSRRPITEMMKKLVVTAENLGINQLQEK
YPYEISGGQKQRVAVARAIITEPEILLADEPTGALDSKSSAALLDVFDEINERGQTILMVTHSTAAASRAKRVLFIKDGI
LYNQIYRGEKTERQMFQEISDTLTVMASEVN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-34 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ABC-NBD NP_358406.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 1e-41 45