Gene Information

Name : ccmH (STM3812)
Accession : NP_462712.1
Strain : Salmonella enterica LT2
Genome accession: NC_003197
Putative virulence/resistance : Unknown
Product : heme lyase subunit
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG4235
EC number : -
Position : 4012321 - 4013364 bp
Length : 1044 bp
Strand : -
Note : similar to Escherichia coli possible subunit of heme lyase (AAC75254.1); involved in cytochrome c-type biogenesis

DNA sequence :
ATGAGACTGTTACCGGGCATGGTGATGCTGATGCTGGCGCTGGTTATCTCCGGGTCAGCGCGGGCAACCACCGACGTGAT
GCCGTTTAAAGATGAAGCGCAGGAGCAGCAGTTCCGCCAGCTCACGGAGCAGCTGCGCTGCCCGAAATGCCAGAACAACA
GCATTGCGGACTCGAACGCGATGATAGCCACCGACATGCGCCGCAGGGTGTATGACCTGATGCAGGAGGGGAAGAGCCGC
CAGGAAATCATCGATTATATGGTGGCGCGCTACGGCAACTTCGTCACCTACGACCCGCCGCTGACCCCGCTGACGGTGCT
GCTGTGGGTGCTGCCGCTGGCCGCCATCGTGGCGGGCGGGTGGATAATCGTCGCCCGCACGCGCCGGCGGGTGCGCCTGC
GCCGGGAGCCGCTGCCGGCGGACACCCCGGTTTGCGGCGCGCGCGCCGGGTGGGGCGTTTACGTGCCGGGGGCCGTCATT
GCGCTGGCGGTCGGCGCCGGCAGCTACGCCCTGACCGGCAGCTATCCGCAGGTCAGGGCCTGGCAGCAGGCAACGGCGCA
GACGCCCGGGCTGCTGGCGCGGGCGCTGGACCCGCAGGCGCAGCCGCTGAATGAGGAGGAGATGGCGCGGCTGGCGCTGG
GGCTGCGCACCCGCCTGCAGAATGATGCCGGCAATGTTGAGGGCTGGCTCATGCTGGGGCGCACCGGTATGGTACTGGGT
AATGCCGGTACCGCCACCGGGGCCTATGCAAACGCTTACCGTCTGGACCCGAAAAACCGCGATGCGGCGCTGGGCTACGC
GGAGGCGCTGACGCGCTCGTCCGACCCGGAGGATAACCGCCGCGGCGGGGAGCTGCTGCGCCGGCTGGTGAGCCGCGACC
ACACGGATATCCGGGTGTTAAGCCTGTATGCGTTTAACGCCTTTGAGCAGCAGCGCTTTGGCGAGGCGGTGGCGGCCTGG
GAGATGATGCTGAAGCTGCTGCCGGCGGGTGACGCCCGGCGGGCGGTGATAGAGCGCAGTATCCGGCTGGCGCAGGAGAA
ATAA

Protein sequence :
MRLLPGMVMLMLALVISGSARATTDVMPFKDEAQEQQFRQLTEQLRCPKCQNNSIADSNAMIATDMRRRVYDLMQEGKSR
QEIIDYMVARYGNFVTYDPPLTPLTVLLWVLPLAAIVAGGWIIVARTRRRVRLRREPLPADTPVCGARAGWGVYVPGAVI
ALAVGAGSYALTGSYPQVRAWQQATAQTPGLLARALDPQAQPLNEEEMARLALGLRTRLQNDAGNVEGWLMLGRTGMVLG
NAGTATGAYANAYRLDPKNRDAALGYAEALTRSSDPEDNRRGGELLRRLVSRDHTDIRVLSLYAFNAFEQQRFGEAVAAW
EMMLKLLPAGDARRAVIERSIRLAQEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ccmH YP_217239.1 heme lyase subunit, cytochrome c-type biogenesis Not tested SPI-12 Protein 1e-126 99