|
Name : STY2208 Accession : NP_456559.1 Strain : Salmonella enterica CT18 Genome accession: NC_003198 Putative virulence/resistance : Unknown Product : conserved hypothetical protein Function : - COG functional category : S : Function unknown COG ID : COG3228 EC number : - Position : 2045940 - 2046737 bp Length : 798 bp Strand : + Note : Similar to Yersinia pseudotuberculosis ORF1 TR:Q9ZEX5 (EMBL:AJ009592) (154 aa) fasta scores: E(): 0, 73.3% id in 135 aa which lies close to three tRNA-Asn which are sites for pathogenicity island integration; Orthologue of E. coli YEEI_ECOLI; Fasta hit to DNA sequence : ATGATTAAGTGGCCCTGGAAAGCACAAGAAATAACCCAGAACGAAGACTGGCCGTGGGATGATGCGCTGGCTATACCTCT TCTGGTAAACCTCACCGCGCAAGAACAGGCTCGGCTTATTGCGCTAGCCGAACGTTTTTTGCAGCAGAAAAGACTGGTAG CGCTACAGGGATTTGAGCTCGACTCGTTAAAAAGTGCACGTATTGCGTTAATTTTTTGCTTACCGATCCTGGAGCTCGGT ATTGAGTGGCTTGATGGTTTTCATGAAGTGCTCATTTATCCCGCGCCCTTTGTGGTAGATGATGAATGGGAAGATGACAT AGGTCTGGTGCACAGCCAGCGTGTCGTACAGTCGGGGCAAAGCTGGCAACAAGGGCCCATCATTCTGAACTGGCTGGATA CCCAGGACTCGTTCGATGCTTCGGGTTTCAACCTCATTATTCATGAAGTTGCGCACAAACTGGATATGCGTAATGGCGAT CGCGCCAGCGGCATCCCTTTCATCCCGTTACGCGATGTGGCTGGCTGGGAACACGATCTCCACGCGGCAATGAATAATAT TCAGGATGAAATCGATCTTGTTGGCGAAAGCGCTGCCAGTATAGATGCCTATGCCGCCACCGACCCTGCAGAATGTTTTG CCGTGTTGTCAGAGTATTTTTTCAGCGCGCCAGAACTGTTTGCTCCACGTTTCCCGGCGCTATGGCAGCGTTTTTGCCAG TTCTATCGCCAGGATCCTTCTCAGCGCTTACGGGTAAGCGCTGCCGAAGGCGACTACGGCGAGGAATCCGAACATTAA Protein sequence : MIKWPWKAQEITQNEDWPWDDALAIPLLVNLTAQEQARLIALAERFLQQKRLVALQGFELDSLKSARIALIFCLPILELG IEWLDGFHEVLIYPAPFVVDDEWEDDIGLVHSQRVVQSGQSWQQGPIILNWLDTQDSFDASGFNLIIHEVAHKLDMRNGD RASGIPFIPLRDVAGWEHDLHAAMNNIQDEIDLVGESAASIDAYAATDPAECFAVLSEYFFSAPELFAPRFPALWQRFCQ FYRQDPSQRLRVSAAEGDYGEESEH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| similar to Escherichia coli substrain MG1655 orf b1976 | AAD37508.1 | unknown | Not tested | PAI IV 536 | Protein | 2e-105 | 81 |
