Gene Information

Name : STY2216
Accession : NP_456567.1
Strain : Salmonella enterica CT18
Genome accession: NC_003198
Putative virulence/resistance : Resistance
Product : putative inner membrane protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG0534
EC number : -
Position : 2051109 - 2052566 bp
Length : 1458 bp
Strand : -
Note : Orthologue of E. coli YEEO_ECOLI; Fasta hit to YEEO_ECOLI (547 aa), 81% identity in 488 aa overlap; Unknown function. Contains hydrophobic, possible membrane-spanning regions

DNA sequence :
ATGTGGTTTCAACTCTCTTCTTTAAGGTCCATTTTGAACGTCTCCACTGCCTTACGCCAGGTTGTCGTCCGTACGCCCTG
GTATGCCAAACGCAAGAGCTACAAAGTGTTGTTCTGGCGTGAAATCACCCCACTTGCTATCCCCATTTTTCTGGAAAATA
CCTGTGTTTTGCTAATGGGCGTGCTCAGTACTTTTCTCGTCAGTTGGTTGGGCAAGGAAGCAATGGCGGGCGTGGGGCTT
GCCGACAGTTTTAATATGGTAATTATGGCTTTTTTTGCGGCTATCGATCTTGGTACTACGGTGGTGGTCGCCTTTAGCCT
CGGCAAGCGCGATAGGCGACGGGCAAGGGCGGCGGCGCGCCAGTCGCTGGTGATTATGACGCTATTTGCCGTTGTGCTGG
CAGTGGTCATTCATTATTTCGGCAGTGAAATTATTAATATTGTCGCAGGCGAGGCGACGCCAGAAGTAAAGGGGCTGGCG
TTAACGTACCTTGAACTGACGGTACTGAGTTATCCGGCTGCGGCAATTGCGCTAATCGGTAGCGGCGCGCTGCGTGGGGC
AGGGAATACGAAAATCCCGTTGATGATTAACGGCGGGATGAACATTCTCAATATTGTCATCAGCAGCATCCTGATTTACG
GGGCTTTCTCCTGGCAAGGGCTGGGTTTTGCCGGTGCGGGGCTGGGATTAACCATTTCGCGCTACATCGGCGCGGTAGCG
ATTATTTGGGTGCTGATGATTGGTTTTAATCCGGCGCTGCGCATTCCGCTGAAAAGCTATCTGAAGCCGTTGAATTTCGG
CATTATCTGGGAAGTGATGGGTATCGGTATTCCGGCGAGCATTGAATCAGTGCTGTTCAACGGTGGCAAGCTACTGACGC
AAATGTTTGTCGCCGGAATGGGCACTAACGTTATTGCGGGTAACTTTATTGCCTTTTCCGTGGCGGCGCTTATCAATCTG
CCGGGTAACGCCCTTGGTTCGGCGTCGACTATTATCACCGGTAAGCGTCTTGGTACCGGGCAAATTGGTCAGGCAGAGCG
TCAATTGCGCCATGTATTCTGGATGTCGACTATCGTACTTACGGCAATCGCCTGGGGAACAGCGCCGTTCGCGGGTCTGT
TTGCCTCATTTTATACCCAGGAGCAGGACGTAAAAGAGGTAGTGAAAGTTCTGCTCTGGCTTAATGCTGCCTTTATGCCA
ATTTGGGCTGCCGCGTGGGTGCTGCCGTCGGGTTTTAAAGGCGCGCGCGATGTGCGATTTGCGATGTGGGTATCGATGCT
GGGGATGTGGGGCTGTCGCGTTGTGGCAGGGTATACGCTTGGTATTGTGCTGGGTATGGGGGTTGTAGGGGTTTGGCTGG
GGATGTTTCTTGACTGGGCCGTGCGTGGCGCACTGTTTTACTGGCGTCTGATAAGCGGGCGCTGGCTGTGGAGATACCTG
CGCGTAAAGAGGGAGTAA

Protein sequence :
MWFQLSSLRSILNVSTALRQVVVRTPWYAKRKSYKVLFWREITPLAIPIFLENTCVLLMGVLSTFLVSWLGKEAMAGVGL
ADSFNMVIMAFFAAIDLGTTVVVAFSLGKRDRRRARAAARQSLVIMTLFAVVLAVVIHYFGSEIINIVAGEATPEVKGLA
LTYLELTVLSYPAAAIALIGSGALRGAGNTKIPLMINGGMNILNIVISSILIYGAFSWQGLGFAGAGLGLTISRYIGAVA
IIWVLMIGFNPALRIPLKSYLKPLNFGIIWEVMGIGIPASIESVLFNGGKLLTQMFVAGMGTNVIAGNFIAFSVAALINL
PGNALGSASTIITGKRLGTGQIGQAERQLRHVFWMSTIVLTAIAWGTAPFAGLFASFYTQEQDVKEVVKVLLWLNAAFMP
IWAAAWVLPSGFKGARDVRFAMWVSMLGMWGCRVVAGYTLGIVLGMGVVGVWLGMFLDWAVRGALFYWRLISGRWLWRYL
RVKRE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
yeeO YP_853088.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 5e-142 78

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STY2216 NP_456567.1 putative inner membrane protein BAC0146 Protein 1e-154 87