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Name : ccmF1 Accession : NP_456794.1 Strain : Salmonella enterica CT18 Genome accession: NC_003198 Putative virulence/resistance : Unknown Product : cytochrome c-type biogenesis protein F1 Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 2305938 - 2307869 bp Length : 1932 bp Strand : - Note : Fasta hit to NRFE_ECOLI (552 aa), 38% identity in 611 aa overlap; Orthologue of E. coli ccmF (CCMF_ECOLI); Fasta hit to CCMF_ECOLI (647 aa), 85% identity in 646 aa overlap DNA sequence : ATGATGCCTGAATACGGCCACGCACTGCTGTGCCTGGCGCTCGGCGTGGCGCTGCTGCTGTCCGTTTACCCGCTGTGGGG CGTGGCGCGCGGCGACGCGCGGATGATGGCGTCGGCCGGGGTGTTCGCCTGGCTGCTGTTCATCTGCGTGGCGGGCGCGT TTTTCGTGCTGGTGCACGCCTTTGTGGTTAACGACTTCACCGTGGCCTATGTCGCCGGCAACTCGAACACGCAGCTGCCG GTGTGGTACCGGGTGGCCGCCACCTGGGGGGCGCACGAGGGCTCGCTGCTGCTGTGGGTGCTGCTGATGAGCGGCTGGAC CCTGGCGGTGGCGGTGTTCAGCCGGCAGGTGCCGGCGGATATCGTCGCCCGGGTGCTGGCGGTGATGGGGATGGTCTGCG CCGGTTTTCTGGCGTTCATCCTGTTCACCTCCGGCCCGTTTGCCCGCACGCTGCCGGCCTTTCCGGTGGAGGGGCGCGAC CTGAACCCGCTGCTGCAGGACCCGGGGCTGATTTTCCACCCGCCGCTGCTGTACATGGGCTATGTCGGCTTCTCGGTGGC CTTCGCCTTCGCCATCGCCGCGCTGCTGAGCGGGCGTCTGGACAGCGCGTTCACCCGTTTTGCCCGCCCGTGGACGCTGG CGGCGTGGGTGTTCCTGACGCTGGGCATCGTGCTCGGCTCGGCGTGGGCCTACTACGAGCTGGGCTGGGGCGGCTGGTGG TTCTGGGACCCGGTGGAGAACGCCTCCTTTATGCCGTGGCTGGCGGGCACCGCCCTGCTGCACTCGCTGGCGGTCACCGA ACAGCGCGCCGGCTTTAAGGCGTGGACGCTGCTGTTGTCCATCTGCGCCTTCTCGCTGTGCCTGCTGGGCACCTTCCTGG TGCGCTCCGGGGTGCTGGTGTCGGTGCACGCCTTCGCCTCCGACCCGGCGCGCGGAATGTTTATCCTCGCCTTTATGGTG CTGGTCACCGGCGGCTCGCTGCTGCTGTTCGCCGTGCGCGGGCACAGGGTGCGTTCGCGGGTGAACAACGCGCTGTGGTC GCGTGAGTCGCTGCTGCTCGGCAACAACGTCCTGCTGATGGCCGCCATGCTGGTGGTGCTGCTGGGTACCCTGCTGCCGC TGGTGCACAAACAGCTGGGGCTGGGCAGCATTTCGGTGGGGGAGCCGTTCTTTAACACCATGTTCACCTGGCTGATGGTC CCCTTTGCCCTGCTGCTGGGGGTGGGGCCACTGGTGCGCTGGGGCCGGGACCGGCCGCGTAACATCAGGAAACTGCTGCT CACCGCCCTGGTCTCCACCCTGGTGCTGTCGGTACTTTTGCCATGGCTGCTGGAAGATAGAATCATCGCCATGACGGCGG TGGGGATGGCGATGGCCTGCTGGATTGCGGTGCTGGCGGTGGCCGAAGCCGTACAGCGCGTGTCCCGCGGCACGAAAACC TCTCTCAGCTACTGGGGAATGGTGGCGGCGCACCTCGGGCTGGCGGTGACGATTACCGGTATCGCCTTCAGCCAGAATTA CAGCGTGGAGCGTGACGTGCGGATGCGGGCGGGCGACAGCGTGACCATTCACGACTACCGCTTCACCTTCCGGGAGGTGC GGGACATCACCGGGCCCAACTACCGCGGCGGGGTGGCCCTCATCGGGGTGACGCGCCACGGCGAGCCGGAGGCGGTGCTG CACGCGGAGAAACGGCTCTACAACACCAGCCGGATGGTGATGACCGAGGCGGCGATTGACGGCGGGCTGACCCGCGACCT GTACGCCGCGCTCGGGGAGGAGCTGGACAACGGCGCGTGGGCCGTGCGCCTGTACTACAAACCGTTTGTCCGCTGGATAT GGGCCGGGGGGCTGCTGATGGCGCTGGGCGGGCTGCTGTGCCTGGCGGACCCGCGCTACCGCCGCCGTAAACCATTGCCG GAGGCCGGATGA Protein sequence : MMPEYGHALLCLALGVALLLSVYPLWGVARGDARMMASAGVFAWLLFICVAGAFFVLVHAFVVNDFTVAYVAGNSNTQLP VWYRVAATWGAHEGSLLLWVLLMSGWTLAVAVFSRQVPADIVARVLAVMGMVCAGFLAFILFTSGPFARTLPAFPVEGRD LNPLLQDPGLIFHPPLLYMGYVGFSVAFAFAIAALLSGRLDSAFTRFARPWTLAAWVFLTLGIVLGSAWAYYELGWGGWW FWDPVENASFMPWLAGTALLHSLAVTEQRAGFKAWTLLLSICAFSLCLLGTFLVRSGVLVSVHAFASDPARGMFILAFMV LVTGGSLLLFAVRGHRVRSRVNNALWSRESLLLGNNVLLMAAMLVVLLGTLLPLVHKQLGLGSISVGEPFFNTMFTWLMV PFALLLGVGPLVRWGRDRPRNIRKLLLTALVSTLVLSVLLPWLLEDRIIAMTAVGMAMACWIAVLAVAEAVQRVSRGTKT SLSYWGMVAAHLGLAVTITGIAFSQNYSVERDVRMRAGDSVTIHDYRFTFREVRDITGPNYRGGVALIGVTRHGEPEAVL HAEKRLYNTSRMVMTEAAIDGGLTRDLYAALGEELDNGAWAVRLYYKPFVRWIWAGGLLMALGGLLCLADPRYRRRKPLP EAG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 0.0 | 99 |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 2e-122 | 55 |
