|
Name : STY0324 Accession : NP_454901.1 Strain : Salmonella enterica CT18 Genome accession: NC_003198 Putative virulence/resistance : Unknown Product : Rhs-family protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG3209 EC number : - Position : 336466 - 338997 bp Length : 2532 bp Strand : + Note : Similar to several Rhs proteins e.g. Streptomyces coelicolor putative Rhs protein TR:CAB82067 (EMBL:AL161803) (927 aa) fasta scores: E(): 0, 28.9% id in 850 aa, and to Escherichia coli RhsB protein precursor rhsB SW:RHSB_ECOLI (P16917) (1411 aa) fasta sco DNA sequence : ATGACGATGCACCGGGAGCCGGGCGGCGAACGGTATTACTACACCTGGGCGTGGTTTGAAGGCCCGGACGATGCGGCGTG GCGGGTGACGGGCCATCATACGGACAGCGGCGAGCAGTACCGTCTGGACTGGAATCTGGCAGAACGTTCGCTGTGCGTGA CGGATAGCATGGGGCGTACGCGCTGCCACTGGTGGGATGCGCAGGGCCTGGTGACGGCGTACCGGGACGAGGCCGGGCAG ATGACCACTTTCCGCTGGAGCGATGAAGAGCGGTTACTGCTGGGGATGACGGACGCGCAGGGTGGCAAATGGCGTTATGT CTATGACCGTCTCGGCCACCTGACGGAGACGCATGACCCGCTGGGCCGGGTTGAGCAGACGCAGTGGCACCCGGTGTGGC ACCAGCCGGAAACGGAGGTGGATGCCGCGGGGGTGGCGTGGCGTTATGAGTATGATGAGCGGGGCAACCTGCAGGCGGTC AGCGACCCGCTGCACCAGCGCACGGTATACGGGTATGACCGGCACGGCCAGGTGGTGCGGATAACCGACGCGCGGGGCGG AGATAAATACCTGCAGTGGAACGAAGACGGACAGCTTATGCGCCACACGGACTGTTCTGGCTCGCAGACGGCATGGTTTT ATGATGAACGCACGCGGCTGGAAAGGGTGACGGACGCGGAGAGTAACAGTACGCGTTACAGCTATGACGGCAACGGACAT CTGACGGAGGTCATGTTCGCGGACGGGCGTACGGAGCGTTACCAGCCGGATGCGGCGGGACGGCTGGTGAAATATACGAG CCCGGCGGGGCAAATAACACGCTGGCAGCGGGACGGCCAGGGGCGGGTGCGCAGGCAGACGGATGCGACGGGTCGCAGGA CGGCGTATGAGTACGACGCTTACGGGCGGCTGACCACGCTCACGAACGAGAACGGGGAAAGCTACCGGTTCCGGTACGAT GTTCTGGACCGGGTGACGGAACAGACGGACCCCGGCGGCAGCCGCCGGGCATACGGGTATAACGCGCTGAATGCGGTGAC GGCAGTGATATACGGCGGGGAGCGCGGGGGAGAAATCCGCCACGGTCTGGAGCGTGATGCGGCGGGGAGGCTGACGGCGA AAATCACGCCGGAGACGCGCACGGAATACCGGTACGACGCGGCGGACCGTCTGCTGGAAATCCGCCGCAGGCGGCATGAT GCGGCGGAAGGCGGAGAGCCGGAAGTTATCCGGTTCAGCTACGACAGTGCGGGTAACCTGCTGAGCGAGGAGACGGCGCA GGGCGTGCTGCAGCACCGGTACGATGTTCAGGGCAACCGCACAGAAACGCAGATGCCGGACGGGCGGACGCTGCGGTACC TGTACTACGGGAGCGGACATCTCCAGCAAATCAACCTGGGGCGTGATGTCATCAGCGAGTTCACGCGCGACCACCTGCAC CGTGAGGTGCAGCGGAGCCAGGGGCGGCTGGACATGCGGCGGATGTACGACCGGACGGGCCGGTTAACGCGGAAACTGAC CTGTAAAGGAATGCGCGGTGTGGTGCCGGAGACGTTTATTGACCGGGAATATGCGTACAGCGGCCAGGATGAGCTGCTGA AAAAGCGGCACAGCCGGCAGGGGGTGACGGATTATTTTTACGACACGACGGGGCGCATCACGGCGTGCCGGAATGAGGCA TACCTGGACAGCTGGCAGTACGACGCGGCGGCGAACCTGCTGGACAGGCGGCAGGGAGAGACCGCGCAGGCGGGTGCAGG CAGCGTGGTGCCGTTCAACCGGATAACGTCATATCGCGGGCTGCATTACCGTTACGATGAATATGGCCGGGTGGTGGAAA AGCGGGGCCGCAACGGCACGCAGCACTACCGCTGGGACGCGGAGCACCGGCTGACGGAAGTGGCGGTCACCCGGGGGGGC ACCGTACGGCGTTACGGGTACGTGTACGACGCGCCGGGCAGGCGGGTGGAGAAGCACGAGCTGGACGCGGAAGGAAAGCC GTATAACCGGACGACGTTTTTATGGGACGGAATGCGGCTGGCACAGGAGTGCAGGCTGGGAAGAAGCAGCAGCCTGTATA TCTACAGCGACCGGGGGAGCCACGAGCCGCTGGCGCGGGTGGACAGGGCGGCGCCGGGCGAAGCGGATGAGGTGCTGTAT TACCATACGGACGTAAACGGCGCGCCGGAGGAGATGACGGACGGCGGGGGCAATATTGTCTGGGAAGCGGGCTATCAGGT ATGGGGGAACCTGACGCATGAAAAAGAAACCCGGCCCGTACAGCAGAACCTGCGTTTCCAGGGGCAATATCTGGACAGGG AAACGGGGCTGCATTACAATTTGTACAGATTTTATGATCCGGATATCGGGAAGTTTATATCGGGCGATCCGATAGGGTTA GCGGGTGGAATAAACCTCTACCAATATGCGCCTAATCCGCTAAGTTATATAGATCCGCTAGGTTTATGTAAAAAATTTGC TGGTAAAGGTTCTCCGGCAGAAAGGGCCAGGAATTATAGAAGCACTGGCTAG Protein sequence : MTMHREPGGERYYYTWAWFEGPDDAAWRVTGHHTDSGEQYRLDWNLAERSLCVTDSMGRTRCHWWDAQGLVTAYRDEAGQ MTTFRWSDEERLLLGMTDAQGGKWRYVYDRLGHLTETHDPLGRVEQTQWHPVWHQPETEVDAAGVAWRYEYDERGNLQAV SDPLHQRTVYGYDRHGQVVRITDARGGDKYLQWNEDGQLMRHTDCSGSQTAWFYDERTRLERVTDAESNSTRYSYDGNGH LTEVMFADGRTERYQPDAAGRLVKYTSPAGQITRWQRDGQGRVRRQTDATGRRTAYEYDAYGRLTTLTNENGESYRFRYD VLDRVTEQTDPGGSRRAYGYNALNAVTAVIYGGERGGEIRHGLERDAAGRLTAKITPETRTEYRYDAADRLLEIRRRRHD AAEGGEPEVIRFSYDSAGNLLSEETAQGVLQHRYDVQGNRTETQMPDGRTLRYLYYGSGHLQQINLGRDVISEFTRDHLH REVQRSQGRLDMRRMYDRTGRLTRKLTCKGMRGVVPETFIDREYAYSGQDELLKKRHSRQGVTDYFYDTTGRITACRNEA YLDSWQYDAAANLLDRRQGETAQAGAGSVVPFNRITSYRGLHYRYDEYGRVVEKRGRNGTQHYRWDAEHRLTEVAVTRGG TVRRYGYVYDAPGRRVEKHELDAEGKPYNRTTFLWDGMRLAQECRLGRSSSLYIYSDRGSHEPLARVDRAAPGEADEVLY YHTDVNGAPEEMTDGGGNIVWEAGYQVWGNLTHEKETRPVQQNLRFQGQYLDRETGLHYNLYRFYDPDIGKFISGDPIGL AGGINLYQYAPNPLSYIDPLGLCKKFAGKGSPAERARNYRSTG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0324 | NP_454901.1 | Rhs-family protein | Not tested | SPI-6 | Protein | 0.0 | 100 |
