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Name : safD Accession : NP_454908.1 Strain : Salmonella enterica CT18 Genome accession: NC_003198 Putative virulence/resistance : Unknown Product : putative fimbrial structural subunit Function : - COG functional category : - COG ID : - EC number : - Position : 346165 - 346635 bp Length : 471 bp Strand : + Note : Similar to Escherichia coli AfaD protein precursor SW:AFAD_ECOLI (Q47038; Q47039; Q47040) (147 aa) fasta scores: E(): 4e-07, 28.6% id in 154 aa, and to Salmonella enteritidis SEF14 fimbrial structural subunit sefD TR:Q53997 (EMBL:U07129) (148 aa) fasta sc DNA sequence : ATGTGGATGAAAATACAGCGAGTGAAAACGGTTATCTATAGCGTAAGCTTACTGGTCGCTGCCAGTAGCTTGGTGCCGAT AGCGAACGCCGCAGAAAAACTTCAGACAACGCTACGTGTAGGTACTTACTTTCGGGCCGGGCATGTGCCAGATGGGATGG TGCTTGCGCAAGGCTGGGTGACTTATCACGGCAGTCACAGCGGGTTTCGGGTATGGAGCGATGAGCAAAAGGCGGGTAAC ACGCCTACCGTATTGCTGCTGAGCGGGCAACAGGATCCTCGCCATCACATTCAGGTTCGCCTGGAGGGCGAGGGGTGGCA ACCAGATACGGTGAGTGGTCGTGGCGCCATTTTAAGAACCGCTGCAGATAACGCCAGTTTCAGTGTGGTCGTTGATGGCA ATCAGGAAGTGCCTGCGGACACCTGGACGCTGGATTTTAAGGCCTGTGCATTGGCGCAGGAGGATACGTAG Protein sequence : MWMKIQRVKTVIYSVSLLVAASSLVPIANAAEKLQTTLRVGTYFRAGHVPDGMVLAQGWVTYHGSHSGFRVWSDEQKAGN TPTVLLLSGQQDPRHHIQVRLEGEGWQPDTVSGRGAILRTAADNASFSVVVDGNQEVPADTWTLDFKACALAQEDT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| safD | NP_454908.1 | putative fimbrial structural subunit | Not tested | SPI-6 | Protein | 3e-63 | 100 |
