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Name : tsaC Accession : NP_454914.1 Strain : Salmonella enterica CT18 Genome accession: NC_003198 Putative virulence/resistance : Unknown Product : outer membrane fimbrial usher protein Function : - COG functional category : N : Cell motility COG ID : COG3188 EC number : - Position : 353209 - 355896 bp Length : 2688 bp Strand : + Note : Previously sequenced Salmonella typhi TsaC TR:Q9XDS2 (EMBL:AB029403) (895 aa) fasta scores: E(): 0, 99.9% id in 895 aa and to Escherichia coli cfa/i fimbrial subunit C precursor CfaC SW:CFAC_ECOLI (P25733) (869 aa) fasta scores: E(): 0, 30.8% id in 869 aa DNA sequence : GTGAGTCGTTATTTCTGGATGTATTATTTACTGGGATTGTGCAGTTTTACCAGCCAGGCAACTCTTATTCCCCCTCCTGG ATTTGAATCTCTGCTGGAAGGACAGACTGAGCAAATTGAAGTGTTGCTACCAGGGCATTCACTGGGATTATTTCCGGTGG TGGTTAAACCGGACACCGTGCAGTTCATGTCCCCATTGATGGTACTTGAAAGCAGTGGGCTTGCCGCGTTGCCGGCCGCA GAACGGCAAAAAGCGCTGGCTGCACTCAGCCGTCCGTTGCTACGTAACAGCAATCTGGTCTGTGGTGTCTCAGAAGCAAA AGACAGCAGCGAGTGTGGTTACGTGGCAACAGATAAAGAGGATGTTGCGGTTATTTTTGATGAGAACAACGCTCAGTTAT CTTTGTTTCTTAACCGGGACTGGTTGCCGGATGAAGAACGACGTGATAAACGCTGGCTGACTCCGACCCCGGAGGGTGTC AGCGCATTTATTCACCGCCAGACGCTGTATCTGAGTGATGATCTCCACAGTCGTAATATGACACTGAATGGTAGCGGTGC CCTGGGGCTTGGTGACGGTCGTTATCTGGGAGGCGACTGGGCGGCTATCTGGAATCAGTCAGAACATTACAATAACAGTC AGGCCTGGTTTGACAATCTGTTTGTCCGTCAGGATCTCGGCAATCAGTATTATCTCCAGGCTGGTCGGATGGATCAGCGG AATCTGTCCAGCGCCACGGGGGGGGATTTTGGGTTCAGTCTGCTTCCCCTGAGCCGGTTTGATGGATTACGAACCGGGAC CACCCAAGCTTATGTTAACCATGAGGTGGACCATAATGCCACTCCGGTTATGGTTCAGGTTACCCGAAATGCCCGTATTG ATATTTATCGTGGCAGCGAGTTGCTGGGGAGTCAGTTCCTGACCCCGGGAATGCATACCCTGGATACTCATTCTCTTCCA CCGGGAAGCTATCCTCTGGCGTTGCGGGTGTATGAGGATGGGATTCTGCGGCGAACGGAGACCCAGCCCTTCAGTAAGGG GGGCAATAGCTTCAGTGCACAGACCCAGTGGTTTATTCAGGGCGGGCTGGAAGATACCGGGGATAAAGCCAGCCATTATG ACGGTGAGACTGTCATGGCTGCCGGATTCCAAACTGGGCTGCGGAAAAATATCAGTCTGACCGAAGGTATCTCTCTGGCA CATGAGGCCTGGTACAGTGAAACCCGACTGAATTCACAGCATGCAGTGCTGGATGGCACGCTGGACCTTTCTGCCGGGAT ACTGCATGGGACAGACAGCACGAGCGGTAACACTGAGCAGGTGACATACAACGACGGATTTTCCGCGAGTCTGTGGCGTA ACCATACGGAAAGTGATGCCTGTAGTGGTCGTCATCCACAGTCAGTGCATGCCAGTATGACCTGCCAGACTTCGATGAAC GCCTCCCTGTCGGTTTCGGTGGGGAACTGGTATGCCCTACTGGGATACAGTACCAGCAGGACAGAAGGTCGGCCGGTTTA CCGGGGATATGATGATAACAGTGACAAAGAAAATGTGTTCTGGCGACAGGCATACATCCCTGCCTCTCACCGCGAATCTG CTCAGGCTAGTGCAACGTACAGCCTTAATATGGCTGGCATGAATATTAATACCCATGGGGGAGTATGGCGAACCCGAAAT GACGGAGTGAATGATGATGGCTTGTTTATGAGTGTCAGTGTGTCATATGCCTCTCAACCACCGACAATGACTGGCAGTAA TAGGTATACCTCAGCCGGGACCGATATTCACAGTAGCCGGAATCAAAAAACACAGACGTCCTGGAATGTGAACCATGTGA GATCCTGGCAGCAGGATCTGTATCGTGAACTGTCGGTGGGTTTCTCCGGTTATAACGACGACAGCTGGAGCGGGAGTCTC GGCGGACGCATGAGCGGCCGTATGGGTGAACTGAGCGCCACTATCAGTAACTCCCATCAACGTAATGCGGGCAGCGCCAG TTCACTCACCGCTGGCTACAGCTCGTCTCTGGCGTTATCCCGTAATGGACTGTTCTGGGGAGGTGGTCAGGACGGTGAAC CGGCCTCTGGCATGGCGGTGAACGTGGAGTCAGAGGGGGACGAGGGCAGTAGCGGGAAAGTAGTCAGCGTTCGTGGCAGC AGCCAGCCGTTCAGTCTCGGTTTTGGTCAGCAGTCGCTGTTGCTGATGGAAGGCTATAACGCCACGGAGGTGACCATTGA GGATGCAGGGGTTAGTTCACAGGGTATGGCAGGCGTAAAAGCGGGAGGGGGAAGCAGGTGTTACTTCCTGACACCCGGGC ATCTGCTGGTTCACAACATCAGCGCCAGTATGAGCCGACTGTACGTTGGCCGCGTACTGGACAAGGATGGCAGACCGCTG CTGGACGCACAGCCACTGAACTATCCATTTTTGTCGTTGGGACCTTCCGGGCGATTTAGCCTGCAGAGCGAGCATAAAGA ATCCAGCCTGTGGCTGCTGTCTAAAAACAGGATCCTGCGTTGTCCGATGTCAGTACATAAACGTCGGGATGTTATGCAGG TAGTGGGTGATGTGCGGTGTGAATTAAGTGACGTGGATGCCCTGCCACAGGCGTTGCAAATATCGCCGCGGGTCATCCGT TTGCTGAACGTGGCAGGTTTGCTGCGCCATTCCGTTCAGGAAGCCTGA Protein sequence : MSRYFWMYYLLGLCSFTSQATLIPPPGFESLLEGQTEQIEVLLPGHSLGLFPVVVKPDTVQFMSPLMVLESSGLAALPAA ERQKALAALSRPLLRNSNLVCGVSEAKDSSECGYVATDKEDVAVIFDENNAQLSLFLNRDWLPDEERRDKRWLTPTPEGV SAFIHRQTLYLSDDLHSRNMTLNGSGALGLGDGRYLGGDWAAIWNQSEHYNNSQAWFDNLFVRQDLGNQYYLQAGRMDQR NLSSATGGDFGFSLLPLSRFDGLRTGTTQAYVNHEVDHNATPVMVQVTRNARIDIYRGSELLGSQFLTPGMHTLDTHSLP PGSYPLALRVYEDGILRRTETQPFSKGGNSFSAQTQWFIQGGLEDTGDKASHYDGETVMAAGFQTGLRKNISLTEGISLA HEAWYSETRLNSQHAVLDGTLDLSAGILHGTDSTSGNTEQVTYNDGFSASLWRNHTESDACSGRHPQSVHASMTCQTSMN ASLSVSVGNWYALLGYSTSRTEGRPVYRGYDDNSDKENVFWRQAYIPASHRESAQASATYSLNMAGMNINTHGGVWRTRN DGVNDDGLFMSVSVSYASQPPTMTGSNRYTSAGTDIHSSRNQKTQTSWNVNHVRSWQQDLYRELSVGFSGYNDDSWSGSL GGRMSGRMGELSATISNSHQRNAGSASSLTAGYSSSLALSRNGLFWGGGQDGEPASGMAVNVESEGDEGSSGKVVSVRGS SQPFSLGFGQQSLLLMEGYNATEVTIEDAGVSSQGMAGVKAGGGSRCYFLTPGHLLVHNISASMSRLYVGRVLDKDGRPL LDAQPLNYPFLSLGPSGRFSLQSEHKESSLWLLSKNRILRCPMSVHKRRDVMQVVGDVRCELSDVDALPQALQISPRVIR LLNVAGLLRHSVQEA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tsaC | NP_454914.1 | outer membrane fimbrial usher protein | Not tested | SPI-6 | Protein | 0.0 | 100 |
