|
Name : tcfD Accession : NP_454915.1 Strain : Salmonella enterica CT18 Genome accession: NC_003198 Putative virulence/resistance : Unknown Product : putative fimbrail protein Function : - COG functional category : - COG ID : - EC number : - Position : 355919 - 356998 bp Length : 1080 bp Strand : + Note : Previously sequenced Salmonella typhi, and Salmonella enterica TsaD or TcfD TR:Q9XDS1 (EMBL:AB029403) (359 aa) fasta scores: E(): 0, 100.0% id in 359 aa and to Escherichia coli cfa/i fimbrial subunit E CfaE SW:CFAE_ECOLI (P25734) (360 aa) fasta scores: E( DNA sequence : ATGAGTAATAAAATGAAGTGGACGAGTATGACAGCCCATTGGTCAGCAATTATTAATTTCATCCGAAAATATGTTTATCC AGCAAGGATAATTGCCATCCTGCTGATGGCTGGCGCTACACTGCCACAAGTCGCCGATGCGATTACCGTCGACCTGAATT ACGACAAGAACAATGTAGCGGTCATCACTCCTGTCTGGTCCCAAGAATGGAGTGTAGCAAATGTGTTGGGGGGATGGGTA TGTCGTTCAAACAGGAATGAAAATGAGGGGGCGTGTGAAGAAACACATTTGGTATGGTGGTATGCTTTTGGAGCTTATTC AAAAATTCGTCTGCGTTTCAGAGAACAAATCAGCCATGCTGAAATCACGCTCATACTGCTCGGCAGTGTTCGTGATGCCT GTTATACTGGTGTCATCAACATGAACGCTGCTGCATGTCAATGGGGTAGGTCGCTGAAACTTAGGATACCTTCAGAAGAG CTTGCGAAGATACCTACAAGCGGAACATGGAAAGCAACGTTAGTCCTGGATTATTTACAATGGGGCGGAGACGATCCTTT AGGCACATCAACTACAGATATCACGCTGAATGTAACAGACCACTTTGCTGAAAATGCGGCTATTTACTTTCCGCAATTTG GTACAGCAACGCCCCGGGTGGACCTGAATCTTCACCGGATGAATGCCTCACAAATGTCGGGCAGGGCTAATCTGGATATG TGTCTGTATGACGGAGGTGTGAAAGCCCGTTCATTACAGATGAAGATAGAAGGAAGCAATAAGTCAGGTACGGGATTTCA GGTTATAAAGAGCGATTCTGCTGATACGATTGATTATGCGGTCAGTATGAATTATGGGGGACGAAGTATTCCTGTCACCC GTGGCGTGGAGTTCAGTCTGGATAACGTGGATAAAGCAGCAACGCGTCCGGTGGTACTTCCCGGGCAACGGCAGGCGGTA CGTTGTGTGCCAGTGCCCCTTACCCTGACAACACAACCCTTTAACATCAGAGAGAAGCGTTCTGGTGAGTATCAGGGAAC GCTGACAGTGACAATGCTGATGGGAACACAAACCCCCTGA Protein sequence : MSNKMKWTSMTAHWSAIINFIRKYVYPARIIAILLMAGATLPQVADAITVDLNYDKNNVAVITPVWSQEWSVANVLGGWV CRSNRNENEGACEETHLVWWYAFGAYSKIRLRFREQISHAEITLILLGSVRDACYTGVINMNAAACQWGRSLKLRIPSEE LAKIPTSGTWKATLVLDYLQWGGDDPLGTSTTDITLNVTDHFAENAAIYFPQFGTATPRVDLNLHRMNASQMSGRANLDM CLYDGGVKARSLQMKIEGSNKSGTGFQVIKSDSADTIDYAVSMNYGGRSIPVTRGVEFSLDNVDKAATRPVVLPGQRQAV RCVPVPLTLTTQPFNIREKRSGEYQGTLTVTMLMGTQTP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tcfD | NP_454915.1 | putative fimbrail protein | Not tested | SPI-6 | Protein | 4e-167 | 100 |
