Gene Information

Name : tinR
Accession : NP_454916.1
Strain : Salmonella enterica CT18
Genome accession: NC_003198
Putative virulence/resistance : Unknown
Product : transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1522
EC number : -
Position : 357131 - 357586 bp
Length : 456 bp
Strand : +
Note : Similar to Salmonella enterica TinR protein TR:Q9RIR7 (EMBL:AJ242964) (151 aa) fasta scores: E(): 0, 99.3% id in 151 aa, Escherichia coli hypothetical transcriptional regulator in mdl-cof intergenic region YbaO SW:YBAO_ECOLI (P54986; P71209; P77575) (152

DNA sequence :
ATGACTGTGTATTTAGATGATAAAGATAAAGAATTATTGAAAGAAATCCAAAAAGATTGTGCACAAACTTTATGGCAACT
TGCATATAAAGTGGGACTTACGCCCACACCATGTTTCAAACGTTTAAAAAAACTTAAAGACAGGGGGGTTATCATTGGTC
AGTTCGCTTTATTGGATAAAGAAAAACTAGGTCTTTCACTTAATGTCTTTATTATGATTAACATATCTGAGGAGCAATAC
GCTAGTATTTCTGAGAAAATAAAGTCAATGCCTGAGGTTATTGCCTTTTATCGAATTTCTGGATCATTTAATTATTTAAT
GCATACAGTATTTACAGATATGAACGATTACTATAGTTTTTATGAGAAAATAATATTAACTAATTCTTCAATTAGTGGAT
CTGCATCGAGCTTTGTTCTTGAGCAAATAAAGGAAACAAACGAACTGCCAGTGTGA

Protein sequence :
MTVYLDDKDKELLKEIQKDCAQTLWQLAYKVGLTPTPCFKRLKKLKDRGVIIGQFALLDKEKLGLSLNVFIMINISEEQY
ASISEKIKSMPEVIAFYRISGSFNYLMHTVFTDMNDYYSFYEKIILTNSSISGSASSFVLEQIKETNELPV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tinR NP_454916.1 transcriptional regulator Not tested SPI-6 Protein 3e-66 100