Gene Information

Name : STY0553
Accession : NP_455102.1
Strain : Salmonella enterica CT18
Genome accession: NC_003198
Putative virulence/resistance : Resistance
Product : hypothetical ABC transporter ATP-binding protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4181
EC number : -
Position : 559663 - 560349 bp
Length : 687 bp
Strand : +
Note : Fasta hit to ARTP_ECOLI (242 aa), 37% identity in 214 aa overlap; Fasta hit to YCFV_ECOLI (233 aa), 44% identity in 216 aa overlap; Fasta hit to SSUB_ECOLI (255 aa), 39% identity in 214 aa overlap; Fasta hit to ZNUC_ECOLI (251 aa), 34% identity in 206 aa

DNA sequence : 
ATGCCAGCGGAAAACAGTGTTGAAGTTCATCGTCTCAGGAAGTCCGTCGGTCAGGGTGAGCATGAGCTTTCCATCCTTAC
CGGAGTTGAACTGGTTGTCAAACGCGGCGAAACCATTGCGCTGATTGGCGAATCAGGATCGGGAAAATCTACGCTGCTGG
CGATTCTCGCCGGACTGGATGACGGCAGTAGCGGAGAGGTCAGTCTGGTCGGGAAACCGCTTCATCAGATGGACGAAGAG
GCGCGGGCGCAGCTTCGCGCTCAGCATGTCGGTTTTGTTTTTCAATCCTTCATGCTTATTCCTACGCTTAACGCGCTGGA
AAACGTTGAGCTACCGGCCCTGCTACGCGGTGAAAACAGCGGTCAGAGTAAGGCGGGGGCGAAAGCGCTGCTCGAACAAC
TGGGACTGGGAAAACGGCTTGACCACCTTCCGGCACAGCTTTCCGGCGGCGAACAGCAGCGCGTAGCGCTGGCGCGCGCG
TTTAACGGGCGTCCTGATGTGCTGTTTGCCGATGAGCCGACGGGCAACCTTGACCGTCAGACCGGAGATAAAATCGCCGA
CCTGCTATTTTCGCTTAACCGCGAGCACGGCACTACGCTGATTCTGGTGACGCACGACCCGGCGCTGGCGGCGCGCTGCG
ACCGGCGGCTACGGTTGGTCAACGGTCAGTTACAGGAGGAGGCATGA

Protein sequence : 
MPAENSVEVHRLRKSVGQGEHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGEVSLVGKPLHQMDEE
ARAQLRAQHVGFVFQSFMLIPTLNALENVELPALLRGENSGQSKAGAKALLEQLGLGKRLDHLPAQLSGGEQQRVALARA
FNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDPALAARCDRRLRLVNGQLQEEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-31 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-31 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-31 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-31 42
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-22 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STY0553 NP_455102.1 hypothetical ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 5e-32 48
STY0553 NP_455102.1 hypothetical ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 6e-38 47
STY0553 NP_455102.1 hypothetical ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 2e-34 42