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Name : STY0678 Accession : NP_455206.1 Strain : Salmonella enterica CT18 Genome accession: NC_003198 Putative virulence/resistance : Unknown Product : cold shock-like protein cspE Function : - COG functional category : K : Transcription COG ID : COG1278 EC number : - Position : 677679 - 677888 bp Length : 210 bp Strand : + Note : Fasta hit to CSPC_ECOLI (68 aa), 84% identity in 68 aa overlap; Fasta hit to CSPH_ECOLI (70 aa), 50% identity in 64 aa overlap; Fasta hit to CSPI_ECOLI (70 aa), 70% identity in 70 aa overlap; Fasta hit to CSPA_ECOLI (69 aa), 72% identity in 67 aa overlap; DNA sequence : ATGTCTAAGATTAAAGGTAACGTTAAGTGGTTTAATGAATCCAAAGGATTCGGTTTCATTACTCCGGAAGATGGCAGCAA AGACGTGTTTGTACACTTCTCTGCAATCCAGACCAATGGTTTTAAAACTCTGGCTGAAGGTCAGCGCGTAGAGTTCGAAA TCACTAACGGTGCCAAAGGCCCTTCCGCTGCAAACGTAACTGCTCTGTAA Protein sequence : MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAANVTAL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAO18076.1 | unknown | Not tested | TTSS locus | Protein | 7e-19 | 73 |
| cspH | YP_216241.1 | cold shock protein-like protein | Not tested | SPI-11 | Protein | 3e-07 | 49 |
