Gene Information

Name : cspD
Accession : NP_455433.1
Strain : Salmonella enterica CT18
Genome accession: NC_003198
Putative virulence/resistance : Unknown
Product : cold shock-like protein CspD
Function : -
COG functional category : K : Transcription
COG ID : COG1278
EC number : -
Position : 933501 - 933722 bp
Length : 222 bp
Strand : -
Note : Similar to Escherichia coli cold shock-like protein cspd cspd or cspH SW:CSPD_ECOLI (P24245) (74 aa) fasta scores: E(): 1.9e-28, 94.4% id in 71 aa, and to Haemophilus influenzae cold shock-like protein cspd cspd or hi1434.1 SW:CSPD_HAEIN (P46449) (72 aa)

DNA sequence :
ATGGAAACGGGTACTGTAAAGTGGTTCAACAATGCCAAAGGGTTTGGTTTCATCTGCCCTGAAGGCGGCGGCGAGGATAT
TTTCGCCCATTATTCCACCATTCAAATGGATGGTTACAGAACGCTTAAAGCCGGACAGTCTGTCCGGTTTGATGTCCACC
AGGGGCCAAAAGGCAATCACGCCAGCGTCATCGTGCCCATCGAAGCAGAGGCCGTTGCATAG

Protein sequence :
METGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVRFDVHQGPKGNHASVIVPIEAEAVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18076.1 unknown Not tested TTSS locus Protein 6e-15 51