Gene Information

Name : lmo1179 (lmo1179)
Accession : NP_464704.1
Strain : Listeria monocytogenes EGD-e
Genome accession: NC_003210
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 1207111 - 1208571 bp
Length : 1461 bp
Strand : +
Note : similar to acetaldehyde dehydrogenase / alcohol dehydrogenase

DNA sequence :
GTGGCACTAGAAGATAAAGATTTACGCTCAATCCAAGAAGTTCGTAACCTCATTGAATCAGCTAACAAAGCACAAAAAGA
ACTTGCTGCAATGAGCCAACAACAAATTGATACAATTGTAAAAGCGATTGCTGATGCCGGTTATGGTGCTCGTGAAAAAC
TCGCAAAAATGGCACATGAAGAAACTGGTTTTGGAATTTGGCAAGACAAAGTAATTAAAAACGTCTTCGCTTCCAAGCAC
GTCTACAATTACATCAAAGATATGAAAACCATTGGTATGTTAAAAGAAGATAACGAAAAGAAAGTAATGGAGGTTGCAGT
TCCACTAGGTGTAGTTGCAGGATTAATTCCTTCTACAAACCCTACATCCACTGTTATTTACAAAACACTAATTTCGATTA
AAGCAGGAAATAGTATCGTATTTTCTCCACATCCAAACGCACTAAAAGCAATTCTTGAAACAGTAAGAATTATTAGTGAA
GCTGCAGAAAAAGCTGGGTGTCCAAAAGGCGCTATCAGCTGTATGACTGTTCCAACAATCCAAGGAACAGATCAACTGAT
GAAACACAAAGATACAGCAGTTATCCTTGCAACAGGTGGTTCTGCAATGGTAAAAGCGGCTTATTCATCTGGTACTCCAG
CAATTGGAGTTGGCCCAGGTAATGGCCCAGCATTTATCGAACGCAGTGCCAACATTCCTCGCGCAGTGAAACATATTCTT
GATTCCAAAACATTCGATAACGGAACAATTTGCGCATCTGAGCAATCTGTCGTTGTTGAACGTGTGAATAAAGAAGCTGT
CATTGCTGAATTTAGAAAACAAGGAGCACACTTCTTATCAGATGCAGAAGCTGTTCAACTTGGTAAATTCATCTTACGTC
CAAATGGTTCAATGAATCCAGCAATCGTAGGTAAAAGCGTGCAACATATCGCTAACCTTGCTGGTCTAACAGTTCCAGCT
GACGCAAGAGTACTTATCGCTGAAGAAACAAAAGTTGGTGCTAAAATCCCTTATTCAAGAGAAAAATTAGCTCCAATCTT
GGCTTTCTATACAGCAGAAACTTGGCAAGAAGCTTGCGAACTTAGCATGGATATTCTTTATCATGAAGGAGCTGGACATA
CTTTAATCATCCACTCTGAAGATAAAGAAATCATCCGCGAATTCGCACTGAAAAAACCAGTTTCCCGTCTTTTAGTTAAT
ACACCAGGAGCGCTTGGCGGAATTGGCGCAACAACAAATCTTGTACCTGCTTTAACACTTGGTTGTGGGGCAGTTGGAGG
AAGTTCATCATCTGATAATATCGGACCTGAAAATCTTTTCAACATTCGCCGCATCGCTACAGGAGTTTTAGAGTTAGAAG
ATATTCGTAAAGAAGAAAACCAAGCAACATCTGAACTTCCGGTTGATGCAGACGCACTGATCCAAAGTTTAGTAGAAAAA
GTTTTAGCAGAATTAAAATAA

Protein sequence :
MALEDKDLRSIQEVRNLIESANKAQKELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQDKVIKNVFASKH
VYNYIKDMKTIGMLKEDNEKKVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISE
AAEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSAMVKAAYSSGTPAIGVGPGNGPAFIERSANIPRAVKHIL
DSKTFDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIANLAGLTVPA
DARVLIAEETKVGAKIPYSREKLAPILAFYTAETWQEACELSMDILYHEGAGHTLIIHSEDKEIIREFALKKPVSRLLVN
TPGALGGIGATTNLVPALTLGCGAVGGSSSSDNIGPENLFNIRRIATGVLELEDIRKEENQATSELPVDADALIQSLVEK
VLAELK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42076.1 hypothetical protein Not tested PAI II 536 Protein 7e-124 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lmo1179 NP_464704.1 hypothetical protein VFG1595 Protein 4e-124 56