Gene Information

Name : lin1123 (lin1123)
Accession : NP_470460.1
Strain : Listeria innocua Clip11262
Genome accession: NC_003212
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 1140633 - 1140908 bp
Length : 276 bp
Strand : +
Note : similar to carboxysome structural protein

DNA sequence : 
ATGAATAACGCACTAGGAATGATTGAAACTAAAGGACTTGTTGGCGCAATTGAAGCAGCTGACGCAATGGTAAAAGCAGC
AAATGTATCGCTTGTAGGTTATGAAAAAATCGGTTCAGGACTTGTAACTGTTATGGTTCGCGGTGATGTTGGCGCAGTAA
AAGCAGCAACAGATGCAGGCGCAGCAGCAGCTCGTAATGTTGGAGAAGTACAATCTATCCACGTTATCCCACGTCCACAC
AATGATGTAGAAACGTTGCTACCAAAAGGTTTATAA

Protein sequence : 
MNNALGMIETKGLVGAIEAADAMVKAANVSLVGYEKIGSGLVTVMVRGDVGAVKAATDAGAAAARNVGEVQSIHVIPRPH
NDVETLLPKGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 3e-14 67
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 2e-13 65
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 2e-13 65

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lin1123 NP_470460.1 hypothetical protein VFG1596 Protein 1e-14 67
lin1123 NP_470460.1 hypothetical protein VFG1598 Protein 7e-14 65
lin1123 NP_470460.1 hypothetical protein VFG1597 Protein 7e-14 65