Gene Information

Name : lin1130 (lin1130)
Accession : NP_470467.1
Strain : Listeria innocua Clip11262
Genome accession: NC_003212
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1454
EC number : -
Position : 1145593 - 1146711 bp
Length : 1119 bp
Strand : +
Note : similar to NADPH-dependent butanol dehydrogenase

DNA sequence : 
ATGAATAGCTTTCAAATCAAGACAAAAGTAGCTTTTGGTACGAATAGTTTACAAGTTTTAAAAGAAATTAAAAATAAAAA
TGTTTGGATTATTTGTGATCGTTTTTTGGCGGATGGAGAGGGACTTCAAGGTTTAGTTGGGCAGTTAGATGCATCTAATA
ATGTGCATATTTTCACCGATGTAGTTCCAGATCCACCCATTTCAAAAGTAGCTAGTGGTGTTAGTGAAGCAGGAAAAATT
CAGCCTCAAGTCATGATCGCTTTTGGCGGTGGCTCAGCAATTGATACGGCAAAAGGAATTTACTACTTCGCAAAACGCTT
AGAAAAAATTAATATTAGTACTTTTATAGCGATTCCAACTACAAGTGGCACTGGATCTGAAGTGACAGCTGCTACCGTTA
TTACTGATCCAACGACAAAAATTAAGTATCCACTTTTCTTAGATGAACTTATTCCGGATATGGCTATTCTTGACGCGCAA
CTCGTTGTCACAGTGCCGCCAGCGATTACAGCGAATACTGGAATGGATGTATTAACACACGCGATTGAAGCTTATGTTTC
TAAAGCTGCGAGTGATTATACGGACGCATTAGGTGAAAAAAGTGTGCAATTAACGCTACGCTTTTTAACGAGCTGTTATG
ACGATGGTCGTAATTTAGCTAACCGTGAAAAAATGCATAATGCGTCGACCATGGCAGGTATGGCTTTTAACTGTGCCAAC
CTTGGTTTAAATCATAGTATTGCGCATCAACTAGGTGCACAGTTCCACGTGCCGCACGGTCTAGCTAATGCGATATTACT
TGATGCGGTCATTCGTTTTAACGCCTTCAAAAATCGTGATACTGAACAAAAATATGCTGAACTGGCGCGGATTTGCGGAA
TGGCTTCTAGATCTGATTCCAATGAAACCGCTGTCCGTCTGCTTCGTGAAAGAATTGTCCAAATGATGGAACACATGCAA
ATGCCACGAACATTGACAGATGCTGGCGTAGCAAAAGAAAAAGTCTATGCAAAAATGGACGAAATTGCAACAAATGCACT
GAAAGACGCTTGCTTGCCAACAAGTCCGACGACACCGACACATCAAGAACTAAAAGAAATTTTAGAACAAATTATTTAG

Protein sequence : 
MNSFQIKTKVAFGTNSLQVLKEIKNKNVWIICDRFLADGEGLQGLVGQLDASNNVHIFTDVVPDPPISKVASGVSEAGKI
QPQVMIAFGGGSAIDTAKGIYYFAKRLEKINISTFIAIPTTSGTGSEVTAATVITDPTTKIKYPLFLDELIPDMAILDAQ
LVVTVPPAITANTGMDVLTHAIEAYVSKAASDYTDALGEKSVQLTLRFLTSCYDDGRNLANREKMHNASTMAGMAFNCAN
LGLNHSIAHQLGAQFHVPHGLANAILLDAVIRFNAFKNRDTEQKYAELARICGMASRSDSNETAVRLLRERIVQMMEHMQ
MPRTLTDAGVAKEKVYAKMDEIATNALKDACLPTSPTTPTHQELKEILEQII

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42074.1 hypothetical protein Not tested PAI II 536 Protein 2e-60 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lin1130 NP_470467.1 hypothetical protein VFG1593 Protein 9e-61 41