Gene Information

Name : lin1135 (lin1135)
Accession : NP_470472.1
Strain : Listeria innocua Clip11262
Genome accession: NC_003212
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1454
EC number : -
Position : 1151259 - 1152398 bp
Length : 1140 bp
Strand : +
Note : similar to NADPH-dependent butanol dehydrogenase

DNA sequence : 
ATGCAAAAAGTTAGTTTTAAAACAGATCTTTACATTGGCCAAGGAGCAACAGATCGTTTACTGGATTTTAAAGACAAACA
AATTTTCATCGTAACAGATCCATTTATGGTGAGCTCAGGAATGATTAATGCTATTACGGAAAAAATTGATAAGTCGAATA
CATATACTATTTTTAGCGATATTATTCCTGACCCGCCAATTGAAAACGTTGTAGCTGGAATTGAAGTTTTAAACGAATGT
GATGCCAACTTGATGATCGCTATCGGTGGTGGTTCCGCGATTGATGCGGCGAAAGCGATGAAATTCTTTGGTCAAAAACT
TGGTACGGTGCGCGCAATGCCATTCATCGTAATCCCAACTACAAGTGGAACTGGTTCTGAAGTTACTAGTTTTTCTGTCA
TTACGAATAAAGAAAAAGCAATTAAATATCCACTTATTACTGATGCTATTTTGCCGGATGAAGCGATTTTAGATGCGGAT
TTAGTGAAATCTGTCCCACCTGCAATCACAGCAGACACTGGTATGGATGTACTCACACATGCGCTAGAAGCATACGTTTC
CACAAAAGCAAATGATTATTCGGACGCAATGGCTGAAAAAGTAATCCAATTAGTATTCACATACTTGGAGCGCGCTTATA
AAGACGGAAATGATTTAGAAGCACGCGAAAAAATGCATAATGCTTCTTGTTTAGCAGGTATGGCATTTAATATTACCTCA
CTTGGTTTAAACCATGGTATCGCTCACACAGCCGGTGCTAAGTTTAAAATTCCACATGGTCGTATGAATACTTTACTTTT
GCCACATGTTATTAGTTATAATGCTGGATTAACAAGTGATTTTGGTAACAATCCAGATAACCGTGCTGCAGAACGTTATA
CAGCAATTGCCAAATTACTAAAAATGCCAGCTTCCAATACAAGACTTGGCGTTCGTAGCTTAATTAACGCAATTAAACAA
CTTCAAAAGAAACTCAATATGCCAACAACATTATCTGAATGTGGCGTTAGTCGTACCGATTTAAACGAGCATATTGCGCA
AATCGCGGAAGGTGCGCTGAATGATGGTTGTACTGCAACTAATCCAAGAACACCGACAGAAACAGATGTTAGTGCGATTC
TCGAAAAAATGTTGGCTTAA

Protein sequence : 
MQKVSFKTDLYIGQGATDRLLDFKDKQIFIVTDPFMVSSGMINAITEKIDKSNTYTIFSDIIPDPPIENVVAGIEVLNEC
DANLMIAIGGGSAIDAAKAMKFFGQKLGTVRAMPFIVIPTTSGTGSEVTSFSVITNKEKAIKYPLITDAILPDEAILDAD
LVKSVPPAITADTGMDVLTHALEAYVSTKANDYSDAMAEKVIQLVFTYLERAYKDGNDLEAREKMHNASCLAGMAFNITS
LGLNHGIAHTAGAKFKIPHGRMNTLLLPHVISYNAGLTSDFGNNPDNRAAERYTAIAKLLKMPASNTRLGVRSLINAIKQ
LQKKLNMPTTLSECGVSRTDLNEHIAQIAEGALNDGCTATNPRTPTETDVSAILEKMLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42074.1 hypothetical protein Not tested PAI II 536 Protein 9e-74 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lin1135 NP_470472.1 hypothetical protein VFG1593 Protein 5e-74 48