Gene Information

Name : lin1144 (lin1144)
Accession : NP_470481.1
Strain : Listeria innocua Clip11262
Genome accession: NC_003212
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 1161203 - 1161487 bp
Length : 285 bp
Strand : +
Note : similar to putative carboxysome structural protein

DNA sequence : 
ATGGCAAACGCAAACGCATTAGGTATGATCGAAACAAAAGGTTTAGTAGGAGCAGTAGAAGCAGCAGACGCAATGGTGAA
AGCAGCTAACGTAACACTTATGGGTAAAGAACAAGTTGGTGGCGGTCTAGTAACAGTTATGGTTCGCGGTGATGTTGGCG
CAGTTAAAGCAGCAACAGATGCAGGCGCAGCAGCAGCTGAACGCGTTGGTGAATTATTATCTGTACACGTAATTCCACGT
CCACACAGCGAAGTAGACGCAATTCTACCAAAAAGCGCTGAATAA

Protein sequence : 
MANANALGMIETKGLVGAVEAADAMVKAANVTLMGKEQVGGGLVTVMVRGDVGAVKAATDAGAAAAERVGELLSVHVIPR
PHSEVDAILPKSAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 1e-08 64
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 9e-09 61
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 2e-08 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lin1144 NP_470481.1 hypothetical protein VFG1596 Protein 6e-09 64
lin1144 NP_470481.1 hypothetical protein VFG1597 Protein 4e-09 61
lin1144 NP_470481.1 hypothetical protein VFG1598 Protein 8e-09 57