Gene Information

Name : lin1146 (lin1146)
Accession : NP_470483.1
Strain : Listeria innocua Clip11262
Genome accession: NC_003212
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4869
EC number : -
Position : 1162421 - 1163062 bp
Length : 642 bp
Strand : +
Note : similar to Salmonella enterica PduL protein

DNA sequence : 
ATGAATAATGAGTTAATAACAAGCCTTATTGAAGAAGTCACTCGCCGTGCATTACTTGAAACTGGCGTAGAAGTAGAAGC
ATCCGGTCGTCACGTCCATTTAGATCGTGAGACAGTTGATGCACTTTTTGGACCTGGGTATGAACTTACTCATTTCCGTG
ACCTATCTCAACCAGGTCAATATGTTTGTAAAGAAAGAATTAGCATTGTTGGACCAAAAAGCGTGATTCATAACGTAGTA
ATTCTTGGACCAATCCGTAAAAAAACACAAGTAGAAATTAGTGCTACAGACGGTACCGCACTTGGTATTAAAGCACCTGT
CCGCGAAAGTGGAGACATAGCCGGGACACCAGGAATTTTACTTTTATCTGCTAAAAACAGTGTTCAATTAACTGAAGGAC
TTATTGTTGCAAAACGCCATATTCATATGACGCCAGAAGATGCAGCAAAACAACAAGTAACACAAAGTGAAATTGTTCAA
GTGAAAATTAATGGCGACAGACCACTGATTTTTGACGATGTGGTCGTTCGAATTAGCCCTGATTTTGCTACATATATGCA
TATTGATTACGACGAAGCCAACGCATGCGGCTTTAAAAAGGGAATTCGAGGTCAAATAATTAAGAAAACAAAGGCAAAAT
GA

Protein sequence : 
MNNELITSLIEEVTRRALLETGVEVEASGRHVHLDRETVDALFGPGYELTHFRDLSQPGQYVCKERISIVGPKSVIHNVV
ILGPIRKKTQVEISATDGTALGIKAPVRESGDIAGTPGILLLSAKNSVQLTEGLIVAKRHIHMTPEDAAKQQVTQSEIVQ
VKINGDRPLIFDDVVVRISPDFATYMHIDYDEANACGFKKGIRGQIIKKTKAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42070.1 hypothetical protein Not tested PAI II 536 Protein 7e-44 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lin1146 NP_470483.1 hypothetical protein VFG1589 Protein 3e-44 46