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Name : tgt (lin1565) Accession : NP_470901.1 Strain : Listeria innocua Clip11262 Genome accession: NC_003212 Putative virulence/resistance : Unknown Product : queuine tRNA-ribosyltransferase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0343 EC number : 2.4.2.29 Position : 1569607 - 1570746 bp Length : 1140 bp Strand : - Note : similar to tRNA-guanine transglycosylase Tgt; Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr) DNA sequence : ATGTCTGCCATTCGTTATGAACTAATAAAAACAGATAAACAAACTGGTGCTCGTCTTGGTAAAATTCATACACCACACGG CACATTTGATACACCCATGTTTATGCCAGTTGGAACACTTGCAACGGTAAAAACAATGTCGCCCGAAGAATTAAAAGCGA TGGGCGCAGGTATTATTTTAAGTAACACCTATCATTTATGGTTACGTCCCGGAGAAGAATTAATTCGAGAAGCGGGCGGG CTACATAAGTTTATGAACTGGGACCAACCAATCTTAACGGATTCAGGCGGTTTTCAGGTGTTTAGTTTGAGTAAAATGCG TGATATTAAAGAAGAGGGCGTTCATTTTCGCAACCATTTAAACGGAGATAAACTTTTCTTATCACCAGAAAAAGCAATCC AAATTCAAAATGCGCTTGGATCGGACATTATGATGAGCTTTGATGAATGTCCGCCGTATCCAGCGTCTCATGAATATATG AAAAAATCAGTAGAAAGAACATCACGCTGGGCTGAACGTGGCTTAAAAGCACACGAAAGACCAGAAGACCAAGGTTTATT TGGTATCGTCCAAGGTGGAGCTTACGAAGACTTACGCGCTCAAAGTGCTAAAGATCTGGTATCTCTAGACTTCCCTGGAT ACTCCATTGGTGGATTGTCTGTCGGTGAACCAAAAGACGTGATGAATCGCGTTTTGGAACACACTACACCACTATTACCA GCTAATAAACCGCGTTATCTAATGGGCGTAGGTTCGCCTGACTCATTAATTGATGGCGTAATTCGAGGAGTGGACATGTT TGACTGTGTTCTTCCCACACGTATTGCACGTAATGGTACTTGTATGACATCTAGTGGTCGCTTAGTTATTAAAAACGCTA AGTTCACACATGATTTCCGTCCTATCGATGAAAATTGTGATTGTTATACATGTAAAAATTACTCACGTGCATACATTAGA CACTTGATTCGTTGTGAAGAAACATTTGGAATTAGACTTACAACTTATCATAATCTTCATTTTCTGTTAAACTTAATGAA GCAAGTCCGTAGCGCTATTATGGAAGATCGTCTTGCTGATTTTAGGGAAGAATTTTTTGAGCAATATGGATTCAATCGTC CTGATGCAAAAAATTTCTAA Protein sequence : MSAIRYELIKTDKQTGARLGKIHTPHGTFDTPMFMPVGTLATVKTMSPEELKAMGAGIILSNTYHLWLRPGEELIREAGG LHKFMNWDQPILTDSGGFQVFSLSKMRDIKEEGVHFRNHLNGDKLFLSPEKAIQIQNALGSDIMMSFDECPPYPASHEYM KKSVERTSRWAERGLKAHERPEDQGLFGIVQGGAYEDLRAQSAKDLVSLDFPGYSIGGLSVGEPKDVMNRVLEHTTPLLP ANKPRYLMGVGSPDSLIDGVIRGVDMFDCVLPTRIARNGTCMTSSGRLVIKNAKFTHDFRPIDENCDCYTCKNYSRAYIR HLIRCEETFGIRLTTYHNLHFLLNLMKQVRSAIMEDRLADFREEFFEQYGFNRPDAKNF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tgt | AAT96041.1 | Tgt | Not tested | T-PAI | Protein | 1e-95 | 54 |
| tgt | AAT96105.1 | Tgt | Not tested | T-PAI | Protein | 1e-95 | 54 |
| tgt | AAT96121.1 | Tgt | Not tested | T-PAI | Protein | 1e-95 | 54 |
| tgt | AAT96069.1 | Tgt | Not tested | T-PAI | Protein | 8e-96 | 54 |
| tgt | AAT96181.1 | Tgt | Not tested | T-PAI | Protein | 8e-96 | 54 |
