Gene Information

Name : lin0841 (lin0841)
Accession : NP_470183.1
Strain : Listeria innocua Clip11262
Genome accession: NC_003212
Putative virulence/resistance : Resistance
Product : hypothetical protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1126
EC number : -
Position : 875845 - 876573 bp
Length : 729 bp
Strand : +
Note : similar to amino acid ABC transporter, ATP-binding protein

DNA sequence : 
ATGACTAAACTTAAAGTAACAGGTCTTAAAAAAAGTTTTGGCGCGAATGAAGTGCTAAAAGGCATTGATATAGAAGTAAA
AGAAGGCGAAGTAGTTTGCGTAATTGGGCCATCTGGTTCTGGTAAAAGTACCTTTCTTCGTTGCATGAATAACCTAGAGG
AAATCACGGCTGGTGAAGTTGTTGTAGACGATTTTAATATTACAGATAAAAAAGTAGATATTAATAAAGTTCGCGAAAAC
ATCGGTATGGTTTTTCAACATTTTAATTTATTCCCGCATCTTTCTGTGTTAGAAAATATTACTTTAGCTCCTGTAGAACT
GAAAAAAATGGATAAAGAAGCAGCGAAAAGTAACGCGCTTCGTTTACTTGAGCAAGTTGGGCTAAAAGAAAAAGCAGATG
AGTTTCCAAATCAACTATCTGGCGGACAAAAACAACGGGTTGCGATTGCCAGAGCTCTTGCGATGGATCCAGATATTATG
TTGTTTGACGAACCAACCTCCGCACTTGACCCTGAAATGGTCGGGGAAGTTCTTGGAGTAATGAAAGAGCTAGCTAAAGA
TGGAATGACAATGATGATTGTTACCCACGAAATGGGCTTTGCTCGCGAAGTTGGCGACCGTGTTATCTTTATGGATGGCG
GTTATATCGTGGAAGAAGGAAAGCCAGCTGATATTTTTGACAACCCTACAAACGAAAGAACAATTAGTTTCTTAGACAAA
GTTTTATAA

Protein sequence : 
MTKLKVTGLKKSFGANEVLKGIDIEVKEGEVVCVIGPSGSGKSTFLRCMNNLEEITAGEVVVDDFNITDKKVDINKVREN
IGMVFQHFNLFPHLSVLENITLAPVELKKMDKEAAKSNALRLLEQVGLKEKADEFPNQLSGGQKQRVAIARALAMDPDIM
LFDEPTSALDPEMVGEVLGVMKELAKDGMTMMIVTHEMGFAREVGDRVIFMDGGYIVEEGKPADIFDNPTNERTISFLDK
VL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-29 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lin0841 NP_470183.1 hypothetical protein CP001581.1.gene598.p Protein 6e-28 41
lin0841 NP_470183.1 hypothetical protein NC_012469.1.7686878. Protein 1e-29 41