Gene Information

Name : alr0318 (alr0318)
Accession : NP_484362.1
Strain : Nostoc sp. PCC 7120
Genome accession: NC_003272
Putative virulence/resistance : Virulence
Product : carbon dioxide concentrating mechanism protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 361620 - 361973 bp
Length : 354 bp
Strand : +
Note : ORF_ID:alr0318

DNA sequence : 
ATGTCGTCACTACAGGCAATAGGAGCATTAGAGACTAAGGGATTTCCGGCTGTGTTAGCAGCAGCAGATGCTATGGTCAA
AGCTGGCCGTGTCACCCTTGTGGGTTATATCCGAGTTGGTAGCGCTCGTTTTACAGTCAATATCCGTGGGGATGTTTCGG
AAGTTAAGACAGCGATGGCGGCTGGTGTGGAAGCGGCACAAAATGTTTATGGTGGTACATTAGAGTCCTGGGTGATTATT
CCTCGCCCTCATGAAAACGTTGAAGCAGTCCTACCCATAGGTTATACAGATGCTGTTCAACAATATCGAGATTCTGTAGA
AAATCCCATTATCCGTTCATCCAACAGACGATAA

Protein sequence : 
MSSLQAIGALETKGFPAVLAAADAMVKAGRVTLVGYIRVGSARFTVNIRGDVSEVKTAMAAGVEAAQNVYGGTLESWVII
PRPHENVEAVLPIGYTDAVQQYRDSVENPIIRSSNRR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 4e-08 47
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 2e-09 44
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 9e-10 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
alr0318 NP_484362.1 carbon dioxide concentrating mechanism protein VFG1596 Protein 2e-08 47
alr0318 NP_484362.1 carbon dioxide concentrating mechanism protein VFG1597 Protein 9e-10 44
alr0318 NP_484362.1 carbon dioxide concentrating mechanism protein VFG1598 Protein 4e-10 42