Gene Information

Name : ccmK (alr0867)
Accession : NP_484910.1
Strain : Nostoc sp. PCC 7120
Genome accession: NC_003272
Putative virulence/resistance : Virulence
Product : carbon dioxide concentrating mechanism protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 996487 - 996831 bp
Length : 345 bp
Strand : -
Note : ORF_ID:all0867

DNA sequence : 
ATGTCTATTGCAGTGGGAATGGTAGAAACGCTAGGCTTTCCAGCAGTGGTAGAAGCAGCAGACGCGATGGTGAAAGCCGC
TCGTGTCACTCTAGTAGGCTACGAGAAAATTGGTAGCGGTCGGGTAACAGTAATCGTTAGAGGCGACGTATCTGAAGTAC
AAGCATCTGTAGCCGCAGGTGTTGAATCAGTTAAACGCGTCAACGGCGGACAAGTATTGTCTACACACATCATTGCTCGT
CCTCACGAAAACTTAGAATACGTCTTGCCAATTCGTTATACCGAAGACGTAGAGCAGTTTCGGGAAAATGTGAACGCAAT
TCGTCCTTTCGGCAGAAGACCATAA

Protein sequence : 
MSIAVGMVETLGFPAVVEAADAMVKAARVTLVGYEKIGSGRVTVIVRGDVSEVQASVAAGVESVKRVNGGQVLSTHIIAR
PHENLEYVLPIRYTEDVEQFRENVNAIRPFGRRP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 3e-17 53
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 6e-16 52
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 2e-16 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ccmK NP_484910.1 carbon dioxide concentrating mechanism protein VFG1596 Protein 1e-17 53
ccmK NP_484910.1 carbon dioxide concentrating mechanism protein VFG1598 Protein 2e-16 52
ccmK NP_484910.1 carbon dioxide concentrating mechanism protein VFG1597 Protein 7e-17 50