Gene Information

Name : rnhA (RSc1513)
Accession : NP_519634.1
Strain : Ralstonia solanacearum GMI1000
Genome accession: NC_003295
Putative virulence/resistance : Unknown
Product : ribonuclease H
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0328
EC number : 3.1.26.4
Position : 1614866 - 1615321 bp
Length : 456 bp
Strand : -
Note : An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids

DNA sequence :
ATGCAGGAAGTCACCGTCTATTCCGATGGCGCATGCAAGGGCAACCCGGGCCTCGGCGGCTGGGGCACCGTGCTGGTCTC
GGGCGGCCACGAAAAAGAGCTGTTCGGCGGCGAGGCCGTCACCACAAACAACCGCATGGAGCTGATGGCCGTCATCGAAG
CCTTCCGCGCGCTCAAGCGTCCGTGCCGGGTCAAGGTCTATACCGATTCGCAATACGTGCAGAAAGGCATCAGCGAATGG
CTGGCGGGCTGGAAAGCACGCGGCTGGAAGACCGCCGACAAGAAGCCCGTGAAGAACGACGACCTGTGGCGCACGCTCGA
TGAACTGGTGGTCACGCACGAGGTGAGCTGGCACTGGGTCAAGGGCCACGCGGGCCACCCCGGCAACGAGCGCGCCGATG
CGCTGGCCAACAAGGGGGTGGAGATAGCGCGCCAGGCCATTCAGGCCGGCGCCTGA

Protein sequence :
MQEVTVYSDGACKGNPGLGGWGTVLVSGGHEKELFGGEAVTTNNRMELMAVIEAFRALKRPCRVKVYTDSQYVQKGISEW
LAGWKARGWKTADKKPVKNDDLWRTLDELVVTHEVSWHWVKGHAGHPGNERADALANKGVEIARQAIQAGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rnhA AAO17224.1 RnhA Not tested tcd island Protein 5e-33 49