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Name : glcF (RSc2668) Accession : NP_520789.1 Strain : Ralstonia solanacearum GMI1000 Genome accession: NC_003295 Putative virulence/resistance : Unknown Product : glycolate oxidase iron-sulfur subunit Function : - COG functional category : C : Energy production and conversion COG ID : COG0247 EC number : 1.1.3.15 Position : 2878363 - 2879610 bp Length : 1248 bp Strand : + Note : Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD DNA sequence : ATGCAAATCACGCTCGCGGCGTTCCTGCGGAACACCCCCGACGGCGAAGAGGCCCAGGGCATCGTGCAGAAGTGCGTGCA CTGCGGCTTCTGCACGGCCACCTGCCCGACCTACCAGTTGCTCGGCGACGAGCTCGACGGACCGCGCGGCCGCATCTACC TGATGAAGCAAGTGCTGGAAGGCCAGCCGGCCGGCGAGCGCACCCGCCTGCACCTGGACCGCTGCCTGACCTGCCGCAAC TGCGAATCGACCTGCCCATCGGGCGTGACCTACGGCCGGCTGGTCGAGATCGGCCGCAAGATCGTCGACGACCAGCTCGA CGCGCAGGGCGCATCGCGCCCGCTGGGCGAGCGCGCGATGCGTTGGGTGCTGCGCGAGGGGCTGACGCGGCCGCGGCTGT TCGGCCCCGCGCTCAGGCTGGGCCAGGCCGTGCGCCCGCTGCTGCCAAGCGTGCTGCGCAACAAGGTGCCGGCCAGGGCG CCGCAGGCCGGTACGCGGCCCACCGCCACCCATGCGCGCAAGATGCTGCTGCTGGAAGGCTGCGTGCAGCCGGCCATGTC GCCCAACATCAATGCCGCCGCCGCGCGCGTCTTCGACAGGCTGGGCGTGCAGTTGGTCAGCGCGGACCGTGCGGGCTGCT GCGGCGCGATCCGCTATCACATGAACGACCACGCGGGCGGCCTCGGCAACATGCGCGCCAACATCGACGCCTGGTGGCCG CACATCGAGGCCGGCGCCGAGGCCATCGTCATGACGGCATCCGGCTGCGGCGCGATGGTCAAGGAATACGGCCACCTGCT GCGCGACGACCCGGACTATGCCGAACGGGCGGCGCGCGTGTCGGCCATGACGCGCGATCTGTGCGAGGTGCTGCCCGCCT TCTCCGACCAGCTGCTGCGGCAGGCCAAACCCGAAGCCCACCGACCGCGCGTGGCCTGGCACGCGCCTTGCACGCTGCAG CACGGCCAGCAGATCCGCGGCGCGGTGGAAGGCCTGCTCGCATTATTGGGCGTGGAGGTGCGGCTCTGCACCGACAGCCA CCTGTGCTGCGGATCGGCGGGCACCTATTCGGTGCTGCAGCCCGGACTGGCGTATCGCCTGCGCGACGACAAGCTGCGCC GCTTGCTTGCCACGCAGCCGGAACGTATCGTGTCGGCCAACATCGGCTGCGTGACGCATCTGCAAAGCGGCACCGATACG CCGGTCGAGCATTGGATCGAACTGGTGGACCGCATGCTGGCCGGATGA Protein sequence : MQITLAAFLRNTPDGEEAQGIVQKCVHCGFCTATCPTYQLLGDELDGPRGRIYLMKQVLEGQPAGERTRLHLDRCLTCRN CESTCPSGVTYGRLVEIGRKIVDDQLDAQGASRPLGERAMRWVLREGLTRPRLFGPALRLGQAVRPLLPSVLRNKVPARA PQAGTRPTATHARKMLLLEGCVQPAMSPNINAAAARVFDRLGVQLVSADRAGCCGAIRYHMNDHAGGLGNMRANIDAWWP HIEAGAEAIVMTASGCGAMVKEYGHLLRDDPDYAERAARVSAMTRDLCEVLPAFSDQLLRQAKPEAHRPRVAWHAPCTLQ HGQQIRGAVEGLLALLGVEVRLCTDSHLCCGSAGTYSVLQPGLAYRLRDDKLRRLLATQPERIVSANIGCVTHLQSGTDT PVEHWIELVDRMLAG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcF | CAE85243.1 | GlcF protein | Not tested | PAI V 536 | Protein | 3e-99 | 54 |
