Gene Information

Name : RSc0620 (RSc0620)
Accession : NP_518741.1
Strain : Ralstonia solanacearum GMI1000
Genome accession: NC_003295
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG2041
EC number : -
Position : 666796 - 667569 bp
Length : 774 bp
Strand : +
Note : Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD

DNA sequence : 
GTGAGCACGCCCGAAGAGATCGTCCGGTTAGACCGCAAGCTGATCCTGCGCGATGCCACCCGCGAGTTGAGCATGCCGTC
CCGCCGGCTGTTCGGAAAGCGAGCCATCACGCTCGGCGGATTGCTGCTGCTGACCGGATGTCGCATCACCGACGAACCTT
CAGTGGAATCCTTCCTGATGACGGTTTCGCGCTTCAATGACCGCGTGCAGGCCTGGTTGTTCGACCCACGCCGGCTGGCG
CCAACCTATCCCGAGTCCGAGCTGACACGACCGTTCCCGTTCAATGCTTACTATGGCATCGATGAAGTGCCAGAGGTGGA
CGCTAACGGCTTTCAGCTCGAGGTCGGCGGCCTGGTCTCACGCAAGACGCCGTGGACGCTCGACGCGTTGTACGCATTGC
CGCAGACGTCCCAGGTCACGCGCCATATCTGCGTGGAGGGGTGGAGCGCCGTCGGCAAGTGGGGCGGTACGCGCTTCTCC
GACTTCCTCCAGCGCGTCGGGGCGGATATGACTGCAAAGTACGTGGGTTTTCGGTGCGCCGACGACTATTACTCCAGCAT
CGACATGCCCACCGCGTTGCATCCGCAGACGCTGCTGACATTCACCTATGACGGCGAACGCTTGCCGCCAAAGTACGGAT
TTCCAATGAAGCTGCGCATGCCTACCAAGCTCGGGTACAAGAACCCGAAGCACATCGTTGCGATCTTCGTGACCAACAAG
TATCCGGGCGGTTACTGGGAGGACCAGGGGTACAACTGGTTCGGCGGTTCCTGA

Protein sequence : 
MSTPEEIVRLDRKLILRDATRELSMPSRRLFGKRAITLGGLLLLTGCRITDEPSVESFLMTVSRFNDRVQAWLFDPRRLA
PTYPESELTRPFPFNAYYGIDEVPEVDANGFQLEVGGLVSRKTPWTLDALYALPQTSQVTRHICVEGWSAVGKWGGTRFS
DFLQRVGADMTAKYVGFRCADDYYSSIDMPTALHPQTLLTFTYDGERLPPKYGFPMKLRMPTKLGYKNPKHIVAIFVTNK
YPGGYWEDQGYNWFGGS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42042.1 hypothetical protein Not tested PAI II 536 Protein 6e-67 56
c3567 NP_755442.1 hypothetical protein Not tested PAI I CFT073 Protein 4e-62 55

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RSc0620 NP_518741.1 hypothetical protein VFG1561 Protein 3e-67 56
RSc0620 NP_518741.1 hypothetical protein VFG1704 Protein 2e-62 55