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Name : cyaB (RSp0292) Accession : NP_521853.1 Strain : Genome accession: NC_003296 Putative virulence/resistance : Virulence Product : cyclolysin-type secretion composite ATP-binding transmembrane ABC transporter protein Function : - COG functional category : V : Defense mechanisms COG ID : COG2274 EC number : - Position : 379620 - 381797 bp Length : 2178 bp Strand : - Note : Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD DNA sequence : ATGACCAGCACCTCCATCGACACCCCTGCCACACCAGGGCCCGACCCCACGCGCGCGGAGAAGATCGACACCGCCCTGGC CTGCATCCTGATGATGGCCCGCCTGCACGGCATCGCCGCGGAGGAAGCCCAGTTGCGCCATGAGTTCGGCCACCGCACGT TCGAGACGCAGACGGCGCTGCTGGCCGCCAAGCATCTGGGCCTGTCGGCCAAGGTGGTGCGCCAGCCGGCGGAGCGGCTG CACCGGGCGCCGCTGCCGGCTATCGCCATCGACCGGTCCGGCCAGCACTTCATCCTGGCCAAGTACGACGCGTCCAATGC CGACGAGCCCAAGCTGCTGGTCCAGCGGCCCGGCCAGCCGCCGAGCGTGCTGACGCTGCAGGACTTTCTCGCGGCGTGGT CGGGTGAGCTGATCCTGTGCACCAGCAAGGCGAACTTCGCCGGAGACATGGCGAAGTTCGACTTCACCTGGTTCATTCCC GCCGTCATCAAGTATCGAAAGCTGCTGGGCGAAGTCCTGCTGGTGTCGCTCACGCTGCAGATCATCGGGCTGGTGACGCC GATGTTCTTCCAGGTGGTGATGGACAAGGTGCTGGTCAATCACGCCATGAAGACGCTGAACGTGATCGCCGTCGGCCTGA TCTGCGCGATCCTGTTCGAGGTGACGCTCACCAGCATCCGCACCTGGGTGTTCGCGCATACCAGCAGCAAGATCGACGTG GAACTCGGCGCGCGGCTGTTCCGGCATCTGCTGAGCCTGCCGCTGGCGTATTTCCAGTCGCGGCGCGTGGGCGATTCGGT GGCGCGGGTGCGCGAGCTGGAGAACATCCGCAGCTTCCTGACCGGCAACGCCATGACGGTGGTGCTGGACCTGCTGTTCT CGTTCGTGTTCCTGGCGGTGATGCTGTGGTACAGCGTGTGGCTGACACTGATCGTGGTGGTGTCGATTCCGCTGTATATC GGGCTGTCGGCGGTGTTCACGCCCATCATCCGCGCGCGGCTGGACGTGAAGTTCAACCGCAATGCCGAGAACCAGTCGTT CCTGGTGGAGACCATCAGCGGCATCGATACCGTCAAGGCGATGGCCGTGGAGCCGCGCTGGACGCACAAGTGGGATCAGC AGCTCGCCGCGTACGTCACCGCCGGGCTGGCGGTGACCAACGTGGCGACGGTCGCCAGCGGCGGCGTCACGCTGGTCAGC AAGCTGGTGACGGCGGCCATCATGTGGCTCGGGGCGACGCTGGTGATCGACCACAAGATGACCGTGGGCGAGCTGGTGGC CTTCAACATGCTGGCCGGGCAGGTGTCGTCGCCCATCCTGCGGCTGGCCCAGCTGTGGAACGATTTCCAGCAGGTGGGGA TTTCGATGAGCCGGCTGGGGGACATCCTGAACGCGCGCACCGAGGTCGCCGGCCAGAAATCGCGCCTGCCGAAACTGGCC GGCGCGATTGCGTTCGACCAGGTGGCCTTCCGCTACCGGCCCGATGCGCCCGATGTCATCCGGGGGATTTCGCTCGCGAT CGCGCCGGGCGAGGTGATCGGCATCGTCGGCCGCTCGGGATCGGGCAAGAGCACGCTGACCAAGCTGGTGCAGCGCCTGT ACGTGCCGGAGCGCGGGCGCGTGCTGATCGACGGGCAGGACATCGCCATTGTCGATACGACTTCGCTGCGGCAGCAGATC GGCGTGGTGCTGCAGGAGAACACGCTGTTCAGCCGCTCCATCCGCGACAACATCGCCCTGACGAATCCGGCGGCGCCGCT GGAGGCCATCATCGAGGCGGCCAGGCTGGCCGGCGCGCACGAGTTCATCTGCGAGCTGCCGGAAGGCTACGACACGATCG TCGGCGAGCACGGCACCGGCCTGTCGGGCGGGCAGCGCCAGCGCATCGCGATTGCGCGCGCGCTGCTGACGAATCCGCGC ATCCTCATCTTCGACGAGGCGACCAGCGCGCTGGACTACGAGTCGGAGAAGATCATCCAGGACAACATGCGGCGCATCTG CCAGGGGCGCACCGTGCTGATCATTGCGCACCGGCTGTCGGCGGTGCGCGAGGCCAACCGCATCATCGTCATGGAACGCG GCCAGATCGCGGAAATGGGCAGCCATGACCAGTTGCTGAAACATCCGCAGGGCATCTACGCGCATCTGTACGCCCTGCAG CAGGGAGGTGCGGCATGA Protein sequence : MTSTSIDTPATPGPDPTRAEKIDTALACILMMARLHGIAAEEAQLRHEFGHRTFETQTALLAAKHLGLSAKVVRQPAERL HRAPLPAIAIDRSGQHFILAKYDASNADEPKLLVQRPGQPPSVLTLQDFLAAWSGELILCTSKANFAGDMAKFDFTWFIP AVIKYRKLLGEVLLVSLTLQIIGLVTPMFFQVVMDKVLVNHAMKTLNVIAVGLICAILFEVTLTSIRTWVFAHTSSKIDV ELGARLFRHLLSLPLAYFQSRRVGDSVARVRELENIRSFLTGNAMTVVLDLLFSFVFLAVMLWYSVWLTLIVVVSIPLYI GLSAVFTPIIRARLDVKFNRNAENQSFLVETISGIDTVKAMAVEPRWTHKWDQQLAAYVTAGLAVTNVATVASGGVTLVS KLVTAAIMWLGATLVIDHKMTVGELVAFNMLAGQVSSPILRLAQLWNDFQQVGISMSRLGDILNARTEVAGQKSRLPKLA GAIAFDQVAFRYRPDAPDVIRGISLAIAPGEVIGIVGRSGSGKSTLTKLVQRLYVPERGRVLIDGQDIAIVDTTSLRQQI GVVLQENTLFSRSIRDNIALTNPAAPLEAIIEAARLAGAHEFICELPEGYDTIVGEHGTGLSGGQRQRIAIARALLTNPR ILIFDEATSALDYESEKIIQDNMRRICQGRTVLIIAHRLSAVREANRIIVMERGQIAEMGSHDQLLKHPQGIYAHLYALQ QGGAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hlyB | CAD42038.1 | HlyB protein | Virulence | PAI II 536 | Protein | 0.0 | 57 |
| hlyB | NP_755448.1 | hemolysin B | Virulence | PAI I CFT073 | Protein | 0.0 | 57 |
| hlyB | CAD33760.1 | hemolysin B | Virulence | PAI I 536 | Protein | 0.0 | 57 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| cyaB | NP_521853.1 | cyclolysin-type secretion composite ATP-binding transmembrane ABC transporter protein | VFG1269 | Protein | 0.0 | 66 |
| cyaB | NP_521853.1 | cyclolysin-type secretion composite ATP-binding transmembrane ABC transporter protein | VFG1501 | Protein | 0.0 | 57 |
| cyaB | NP_521853.1 | cyclolysin-type secretion composite ATP-binding transmembrane ABC transporter protein | VFG0907 | Protein | 0.0 | 57 |
| cyaB | NP_521853.1 | cyclolysin-type secretion composite ATP-binding transmembrane ABC transporter protein | VFG1557 | Protein | 0.0 | 57 |
| cyaB | NP_521853.1 | cyclolysin-type secretion composite ATP-binding transmembrane ABC transporter protein | VFG0841 | Protein | 5e-172 | 56 |
