|
Name : prhI (RSp0849) Accession : NP_522410.1 Strain : Genome accession: NC_003296 Putative virulence/resistance : Virulence Product : RNA polymerase sigma factor Function : - COG functional category : K : Transcription COG ID : COG1595 EC number : - Position : 1080267 - 1080776 bp Length : 510 bp Strand : + Note : Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate DNA sequence : GTGCAACAAGCCTGCCTGCCTGCCACCGAAGTGGCTTCCGACTGGTTTCGACAACATTACGCCTGGCTGGCCGGCCGCAT GGGGCGTAAGACGGGCTGCCGTTTCGGGGCGGAAGACCTCGCATCGGAGGCGTTCGCGCAGCTGCTGCAGATGCCGGACT GGCAGGGCACCCGCGAGCCGCGCGCGCTGCTGACCACCATCGCGCAGCGGCTGCTGTACGACATCTGGCGCCGGCGCGAT CTGGAGCTGGCCTACCAGGCGTGGGCCGCGGCGCAGCCCGAAGCCACGCTGCCGTCGCCCGAGGAGCGGGCGCTGGTGCT GGAGGCCCTGGCCACCATCGACCGGCTGCTTGATGGCCTGCCCGTCAAGGCGCGCACGGCATTCCTGTACAGCCAGCTCG ACGGCCTGACCTACCCCGAGATCGCTGGGCGGCTGAACGTTTCGGTGCGCATGGTGCAGAAGTACATGACCCAGGCGATG CGCCTGTGCTACCTGGCAGGCGTGTCGTGA Protein sequence : MQQACLPATEVASDWFRQHYAWLAGRMGRKTGCRFGAEDLASEAFAQLLQMPDWQGTREPRALLTTIAQRLLYDIWRRRD LELAYQAWAAAQPEATLPSPEERALVLEALATIDRLLDGLPVKARTAFLYSQLDGLTYPEIAGRLNVSVRMVQKYMTQAM RLCYLAGVS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAL08458.1 | FecI | Virulence | SRL | Protein | 1e-22 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| prhI | NP_522410.1 | RNA polymerase sigma factor | VFG1049 | Protein | 4e-23 | 45 |
