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Name : nifS (CPE1785) Accession : NP_562701.1 Strain : Clostridium perfringens 13 Genome accession: NC_003366 Putative virulence/resistance : Unknown Product : cysteine desulfurase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG1104 EC number : - Position : 2064248 - 2065444 bp Length : 1197 bp Strand : - Note : similar to prf:2421289A Cys desulfurase from Ruminococcus flavefaciens (396 aa); 55.4% identity in 392 aa overlap DNA sequence : ATGAATAATAGAGTTGTTTATATGGACTACTCAGCAACTACATATGTTAAGCCAGAAGTATTAGAAGAAATGTTACCATA TTTCACAAATAAGTTTGGAAATCCATCAGCATTTTACGGAGTTTCAAGAGAATCAAGAATGGCTGTAGATACTGCTAGAG AAAGAGTAGCTAAAGTATTAAATGCTGATACAAATGAAATCTACTTTACTGGTGGCGGATCAGAAGCAGATAACTGGGCA ATAAAAGGAATAGCTTTTGCTCATAAAAATAAAGGAAATCATATAATAACTACAAAAATAGAGCACCATGCTGTATTACA TACTTGCCAATGGTTAGAAAAACAAGGCTTTAAAGTAACTTACTTAGATGTAAATGAAGAAGGTTTTGTTGATTTAGAAG AATTAAAAAATGCTATTACTGATAAAACTATCTTAGTTTCTGTAATGTTTGCAAACAATGAAATAGGAACTATAGAGCCA GTTAAGGAAATAGGAAAAATTTGTAGAGAAAGAAAAGTAATATTCCATACAGATGCAGTTCAAGCTGTAGGAAATGTAAA GATAGATGTTAAAGATATGAACATCGATTTACTTTCATTAGCTGGACATAAAGTTTATGGACCAAAAGGAATCGGAGCTT TATATATAAGAAAAGGTATAAGAATAGATAACTTAATCCACGGTGGTGGTCAAGAGAGAGCTAGAAGAGCTGGAACTGAG AACATACCTGCAATAGTTGGATTAGGAAAGGCTATGGAAATAGCTGGAGAAAACTTAGATGAGCATATAGCTAAAATTTC TAAGTTAAGAGATAAGTTAATAAAAGGATTATTAGAAGTACCATTTACAAGATTAAACGGACCAAAAGATGGTAGCAAGA GATTACCAGGTAACGTAAATGTATGCTTTGAATTCATTGAAGGTGAAGGAATTCTTCTTTCATTAGACTTTGAAGGAATT TGTGGTTCAAGTGGAAGTGCTTGTACATCAGGATCATTAGATCCATCACACGTGTTATTAGCAATAGGTTTACCTCATGA AATAGCACACGGATCATTAAGATTAAGTTTAGGTGAAGGTACAACTGAAGAAGACGTTGATTACGTATTAGAAAAAGTAC CACCAATAATCGCAAGATTAAGAAGTATGTCACCATTATGGAAAAATCATTTAAGAGAAGTAGAAGGAGAGAATTAA Protein sequence : MNNRVVYMDYSATTYVKPEVLEEMLPYFTNKFGNPSAFYGVSRESRMAVDTARERVAKVLNADTNEIYFTGGGSEADNWA IKGIAFAHKNKGNHIITTKIEHHAVLHTCQWLEKQGFKVTYLDVNEEGFVDLEELKNAITDKTILVSVMFANNEIGTIEP VKEIGKICRERKVIFHTDAVQAVGNVKIDVKDMNIDLLSLAGHKVYGPKGIGALYIRKGIRIDNLIHGGGQERARRAGTE NIPAIVGLGKAMEIAGENLDEHIAKISKLRDKLIKGLLEVPFTRLNGPKDGSKRLPGNVNVCFEFIEGEGILLSLDFEGI CGSSGSACTSGSLDPSHVLLAIGLPHEIAHGSLRLSLGEGTTEEDVDYVLEKVPPIIARLRSMSPLWKNHLREVEGEN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAT96060.1 | cysteine desulfurase | Not tested | T-PAI | Protein | 2e-66 | 45 |
