Gene Information

Name : pduJ (CPE0903)
Accession : NP_561819.1
Strain : Clostridium perfringens 13
Genome accession: NC_003366
Putative virulence/resistance : Virulence
Product : propanediol utilization protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 1105721 - 1106011 bp
Length : 291 bp
Strand : +
Note : similar to prf:2520232K pduJ gene from Salmonella enterica (91 aa); 58% identity in 88 aa overlap

DNA sequence : 
ATGGCAAACGCAAACGCATTAGGAATGATCGAAACTAGAGGATTAGTAGGAGCAATAGAAGCTGCTGACGCAATGGTTAA
GGCTGCAAATGTTCAATTAGTAGGAAAAGAACAAGTTGGTGGAGGATTAGTAACTGTTATGGTTAGAGGAGATGTTGGAG
CTGTTAAAGCTGCTACTGACGCTGGAGCTGCTGCTGCTGAAAGAGTTGGAGATTTAATATCAGTACATGTAATCCCAAGA
CCACACTTTGAAGTGGATGCTATATTACCAAAGGCACCAAAAGCTGAATAA

Protein sequence : 
MANANALGMIETRGLVGAIEAADAMVKAANVQLVGKEQVGGGLVTVMVRGDVGAVKAATDAGAAAAERVGDLISVHVIPR
PHFEVDAILPKAPKAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 4e-12 62
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 8e-12 60
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 1e-11 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pduJ NP_561819.1 propanediol utilization protein VFG1596 Protein 1e-12 62
pduJ NP_561819.1 propanediol utilization protein VFG1597 Protein 3e-12 60
pduJ NP_561819.1 propanediol utilization protein VFG1598 Protein 5e-12 56