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Name : HCM2.0109c (HCM2.0109c) Accession : NP_569581.1 Strain : Genome accession: NC_003385 Putative virulence/resistance : Unknown Product : putative ribonuclease H Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0328 EC number : 3.1.26.4 Position : 85641 - 86249 bp Length : 609 bp Strand : - Note : similar to (EMBL:X57159) rnhA, Salmonella typhimurium ribonuclease HI DNA sequence : ATGACGACAAAGACCCCAGCCCGGCAACATACTGGCTGCCGCACGAAGTCCAAAGCCAGATACCAAACCCACCAGCAATC CCGTACCAACTTCAAAACCCCCGTAGTCGAGTTCAATCCCCAGCTCAAAACCGTAAAAGTATTCAGTGATGGCTCTTGCC TCAAAAATCCGGGCGGGCCGGGCGGTTACGGCATCGTTCTCCAGTATCGAGGCGAAGAGCGCGAGCTTTCTGAGGGCTTC CACAGCACGACCAACAATCGGATGGAGATGATGGGCGCCCTGATTGCGCTGGAGCGTCTGAAGTACCCCTGCAATGTGAT CCTGCATTCCGACAGCCAGTATCTTAAAAACGGCATGACGCTCTGGATGAAAGGCTGGAAGCGTAACGGATGGATCACGT CTGAGAAGAAGCCAGTCAAAAACGTCGATCTCTGGAAGCGTCTCGATGCGGCCGCCAGCCGTCACAATGTCCGCTGGAAG TGGGTTAAAGGTCATGCCGGTCATCGCGAGAACGAAATGTGTGACCGCCTGGCGAAGATCGCCGCCTACTCCGCAGCTGA TATGCCTCACAAGCGTGACATTGGATTTTTGTCACAAAATGATAAGTAA Protein sequence : MTTKTPARQHTGCRTKSKARYQTHQQSRTNFKTPVVEFNPQLKTVKVFSDGSCLKNPGGPGGYGIVLQYRGEERELSEGF HSTTNNRMEMMGALIALERLKYPCNVILHSDSQYLKNGMTLWMKGWKRNGWITSEKKPVKNVDLWKRLDAAASRHNVRWK WVKGHAGHRENEMCDRLAKIAAYSAADMPHKRDIGFLSQNDK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rnhA | AAO17224.1 | RnhA | Not tested | tcd island | Protein | 5e-43 | 56 |
