Gene Information

Name : SCE41.20c (SCO3111)
Accession : NP_627329.1
Strain : Streptomyces coelicolor A3(2)
Genome accession: NC_003888
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 3411511 - 3412299 bp
Length : 789 bp
Strand : -
Note : SCE41.20c, possible ABC transport system ATP-binding protein, len: 262 aa; similar to TR: CAB89461(EMBL:AL354048) Streptomyces coelicolor ABC transporter ATP-binding protein SCE25.31, 256 aa; fasta scores: opt: 1240 z-score: 1356.4 E(): 0; 75.2% identity

DNA sequence : 
ATGACATCGGCCGTAAGTATTCCCACGCACGGGAGCACTGGAGGGCGTACGGCCGTTGCCGCGCGAGCGCGGCAGGTCGT
GAAGGCCTATGGATCGGGCGAGACCCGGGTGGTCGCCCTCGACCACGTCGACGTGGACATCGCGCGCGGCCAGTTCACCG
CGATCATAGGCCCCTCGGGGTCCGGCAAGTCCACGCTGATGCACTGCCTGGCCGGCCTGGACACCGTCACCGGCGGGCAG
ATCTACCTCGACGAGACCGAGATCACCGGCCTGAAGGACAAGAAGCTCACGCAGCTGCGCCGGGACCGGATCGGCTTCAT
CTTCCAGGCGTTCAACCTGCTCCCGACGCTCAACGCGATCGAGAACATCACGCTGCCCATGGACATCGCCGGCCGTAAGT
ACGACCGCGCGTGGCTGGACCGGGTCGTGGAGACCGTGGGGCTCGCCGGGCGGCTCAAGCACCGGCCCACCCAGCTCTCC
GGCGGCCAGCAGCAGCGGGTCGCCGTGGCCCGGGCCCTGGCCGCCCAGCCCGAGATCATCTTCGGTGACGAGCCGACCGG
AAACCTGGACTCGCGCGCCGGTGCCGAAGTGCTCGGCTTCCTGCGCCGGTCGGTCACCGAGCTGGGCCAGACCATCGTGA
TGGTCACCCACGACCCGGTGGCCGCCAGCTACGCGGACCGGGTGCTGTACCTCGCCGACGGCCGGATCGTGGACGAGATG
CACAAGCCCACCGCGGAGGCCGTGCTGGACCGCATGAAGGACTTCGACGCCCGGGGGCGCACGTCATGA

Protein sequence : 
MTSAVSIPTHGSTGGRTAVAARARQVVKAYGSGETRVVALDHVDVDIARGQFTAIIGPSGSGKSTLMHCLAGLDTVTGGQ
IYLDETEITGLKDKKLTQLRRDRIGFIFQAFNLLPTLNAIENITLPMDIAGRKYDRAWLDRVVETVGLAGRLKHRPTQLS
GGQQQRVAVARALAAQPEIIFGDEPTGNLDSRAGAEVLGFLRRSVTELGQTIVMVTHDPVAASYADRVLYLADGRIVDEM
HKPTAEAVLDRMKDFDARGRTS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-33 45
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 6e-37 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-37 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-37 43
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 3e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SCE41.20c NP_627329.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 5e-41 46
SCE41.20c NP_627329.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 9e-35 46
SCE41.20c NP_627329.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 3e-37 45
SCE41.20c NP_627329.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 2e-31 43