|
Name : secF (XCC2375) Accession : NP_637729.1 Strain : Xanthomonas campestris ATCC 33913 Genome accession: NC_003902 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecF Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0341 EC number : - Position : 2807233 - 2808201 bp Length : 969 bp Strand : - Note : forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins f DNA sequence : ATGAAAATTTTTCCGCTTCATCTGATCCCGAACGACACCAAGATCGATTTCATGCGCCTGCGCAAGCCGGTGCTGATCTT GATGCTGGTGCTGGCGATCGCCTCGATCGGCATCATCGTCGGCAAGGGCTTCAACTACGCACTGGAATTCACCGGCGGCA CGCTGGTGCAGACCTCGTTTCAGAAGACGGTGGACGTGGACCAGGTGCGCGAGCAGCTGGCCAAGGCCGGCTTCGAAAAC GCGCAGGTGCAGAACGCGCGTGGCGGCAACGAGGTGATGATTCGCCTGCAGGCGCGCGAGCAGCACAACAACCGCGACGA TGCCGCCACCACCGTCGCTGAAGAAGTGCGCAAGGCCGTCAGCACCGAGCAAAATCCTGCCACCGTGCAGCCGGGCGAAT TCGTCGGCCCGCAGGTCGGCAAGGATCTGGCCTTGAACGGCGTGTACGCCACGGTGTTCATGCTGGTGGGCTTTCTGATC TACATCGCGTTCCGCTTCGAGTGGAAGTTCGCTGTGGTCGCCAGCCTGACCGCGTTGTTCGATTTGCTGGTGACGGTGGC CTTCGTGTCGCTGACCGGCCGCGAGTTCGATCTGACCGTGCTGGCGGGCTTGTTGTCGGTGATGGGTTTTGCGATCAACG ACATCATCGTGGTGTTCGACCGCGTGCGCGAAAACTTCCGCGCGCTGCGCGTGGAACCGCTGGAAGTGCTGAACCGCTCG ATCAACCAGACGTTGTCCCGCACGGTGATCACCGCGGTGATGTTCTTCCTGTCTGCATTGGCGTTGTACATCTACGGCGG CGAGTCGATGGAAGGCCTGGCCGAGACGCACATGATCGGCGCGGTGATCGTGGTGATCTCCTCGATCATCGTCGCCGTGC CGATGCTGAGCATCGGGCCGTTCGCTGTGACCAAGCAGGATCTGCTGCCCAAGGCCAAGGACGTGGAGGCGCTGGCGCGT CGTCCTTAA Protein sequence : MKIFPLHLIPNDTKIDFMRLRKPVLILMLVLAIASIGIIVGKGFNYALEFTGGTLVQTSFQKTVDVDQVREQLAKAGFEN AQVQNARGGNEVMIRLQAREQHNNRDDAATTVAEEVRKAVSTEQNPATVQPGEFVGPQVGKDLALNGVYATVFMLVGFLI YIAFRFEWKFAVVASLTALFDLLVTVAFVSLTGREFDLTVLAGLLSVMGFAINDIIVVFDRVRENFRALRVEPLEVLNRS INQTLSRTVITAVMFFLSALALYIYGGESMEGLAETHMIGAVIVVISSIIVAVPMLSIGPFAVTKQDLLPKAKDVEALAR RP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secF | AAT96102.1 | SecF | Not tested | T-PAI | Protein | 1e-44 | 42 |
| secF | AAT96066.1 | SecF | Not tested | T-PAI | Protein | 3e-45 | 42 |
