Gene Information

Name : ccmC (CPS_1032)
Accession : YP_267781.1
Strain : Colwellia psychrerythraea 34H
Genome accession: NC_003910
Putative virulence/resistance : Virulence
Product : heme exporter protein CcmC
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0755
EC number : -
Position : 1058332 - 1059078 bp
Length : 747 bp
Strand : -
Note : identified by similarity to SP:P33929; match to protein family HMM PF01578; match to protein family HMM TIGR01191

DNA sequence :
ATGTGGAAATGGTTACACCCTTATGCAAACCCAGAAGTGTCTTATCACTTTACTAATAAGTTATTACCTTGGTTAAGCGC
CCTTGCGGCAATCTTTCTCGGTATTGGCTTAGTATGGGCATTATTGTTCGCCCCTGCTGATTATCAGCAAGGACATAGCT
TTCGTATCTTCTACATTCATGTACCTGCAGCGTCATTATCTATGGGCATTTATTTTGCTATGGCCGTCGCCGCCTTTAGC
AGCTTAGTATGGCAATTAAAACTTGCCGATGCATCTGCAGCCGCTATGGCTCCTGTTGGCGCAAGCTTCACTGCCATCGC
ACTAATTACTGGTGCTGCTTGGGGTAAACCAATGTGGGGTACTTGGTGGATTTGGGATGCCCGTTTAACATCAGAGCTCA
TTTTACTGTTTTTGTACTTAGGGGTAATTGCCTTACATAACGCATTTGAAGATAAAAACTTAGCCGGTAAAGCTGCTGGA
ATTTTAACGCTTGTTGGCGTGATAAATATCCCAATTATTAAATACTCAGTTGACTGGTGGAATACCTTGCATCAGGGGTC
TACGGTAAGCAAATTAGGTAAGCCGTCAATGTCACTTGATATGTTATGGCCATTCATCTTTTGTTTTATCGGCTTTTCAT
TATTAGTCGGTGTGATCATTTGTCTACGTTTTCGTAATGAAATTCTAGCGCGCAATAGCATTCGTCCCTGGGTGCGTGAG
TTAGTGGAAAACAACTCAAGTAGTTAA

Protein sequence :
MWKWLHPYANPEVSYHFTNKLLPWLSALAAIFLGIGLVWALLFAPADYQQGHSFRIFYIHVPAASLSMGIYFAMAVAAFS
SLVWQLKLADASAAAMAPVGASFTAIALITGAAWGKPMWGTWWIWDARLTSELILLFLYLGVIALHNAFEDKNLAGKAAG
ILTLVGVINIPIIKYSVDWWNTLHQGSTVSKLGKPSMSLDMLWPFIFCFIGFSLLVGVIICLRFRNEILARNSIRPWVRE
LVENNSSS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ccmC AAN62109.1 putative heme exporter protein C Not tested PAGI-2(C) Protein 5e-39 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ccmC YP_267781.1 heme exporter protein CcmC VFG1856 Protein 6e-45 49