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Name : secF (CPS_1123) Accession : YP_267866.1 Strain : Colwellia psychrerythraea 34H Genome accession: NC_003910 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecF Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0341 EC number : - Position : 1146575 - 1147522 bp Length : 948 bp Strand : + Note : forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins f DNA sequence : ATGCAAATTTTACAATTAAAAGAAACTGTCAACTTTATGAGCTATCGCAAGATAGCCTTAGTATTTAGCGCCTTATTAAT GATTGCTTCAATCTTCTCTCTAGCCACTAATAAACTGAACTTTGGTTTAGATTTTACTGGCGGTACTTTGATTGAAGTTG GTTTTCAAGAAGCAGCAGATTTAGAAAAGCTTCGTTTAGTGATGAAAACTAATGGCTTTGCTGATGCGAAAGTGCAATTT TATGGTAGTAGCCGTGATGTTGTGATTCGTTTAGGTTTACGTGATGACGTTAAAGCTGAAATGCTTGGCAATGAAGTACT TGATGTCTTACAAGGAGCGACTGGCCAAACGGTTGATATGCGTCGTATTGAGTTTGTTGGCGCAAGCGTTGGTGATGAGT TAGCAGAGCAGGGTGGTTTAGCTATGCTAACAGCGCTGATCTGTATTTTGATTTACGTTGCTTTTCGATTTGAATGGCGC TTTGCTGTAGGCTCAGTGGTAGCGTTATTTCACGATGTATTATTAACACTTGGTTTGTTTTCAATTTTACAACTAGAGTT TGATTTAACTGTACTTGCAGCGATATTAGCTGTGATAGGTTACTCACTTAACGATACTATTGTTGTTTCAGACCGTATTC GTGAAAACTTTAGAAAAGTGCGCAACAGTGAAGCTGAAGAAATAATTAATATCTCTTTAACGCAAACATTAAGTCGAACT TTTATTACCTCAATTACCACACTATTAGTTCTAGCTGCTTTGTTCTTTCAAGGTGGAGCACTGATTCATGGTTTTGCCAC GGCATTATTATTCGGTGTTTTTGTTGGTACTTACTCTTCAATTTATGTTGCTAGTTTAGTGGCATTATCTCTAGGTATTT CAAAAGAAGATTTAATACCTGAAGTCATTGAAAAAGAAGGTGCAGATCAAGAAGCTATGATGCCTTAA Protein sequence : MQILQLKETVNFMSYRKIALVFSALLMIASIFSLATNKLNFGLDFTGGTLIEVGFQEAADLEKLRLVMKTNGFADAKVQF YGSSRDVVIRLGLRDDVKAEMLGNEVLDVLQGATGQTVDMRRIEFVGASVGDELAEQGGLAMLTALICILIYVAFRFEWR FAVGSVVALFHDVLLTLGLFSILQLEFDLTVLAAILAVIGYSLNDTIVVSDRIRENFRKVRNSEAEEIINISLTQTLSRT FITSITTLLVLAALFFQGGALIHGFATALLFGVFVGTYSSIYVASLVALSLGISKEDLIPEVIEKEGADQEAMMP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secF | AAT96102.1 | SecF | Not tested | T-PAI | Protein | 2e-66 | 50 |
| secF | AAT96066.1 | SecF | Not tested | T-PAI | Protein | 1e-66 | 50 |
