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Name : iscS (CPS_1132) Accession : YP_267875.1 Strain : Colwellia psychrerythraea 34H Genome accession: NC_003910 Putative virulence/resistance : Unknown Product : cysteine desulfurase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG1104 EC number : 4.4.1.- Position : 1154177 - 1155391 bp Length : 1215 bp Strand : + Note : identified by match to protein family HMM PF00266; match to protein family HMM TIGR02006 DNA sequence : ATGAAGCTTCCTATATATTTTGATTATTCAGCTACTACACCAGTAGATAAGCGCGTAGCAGAAAAAATGATGCAGTACAT GACCAATGATGGTCATTTTGGTAACCCTGCATCTCGTTCACATAAATTTGGTTGGCAAGCTGAAGAAGCGGTTGATATCG CTCGTAATCAAATTGCTGAATTGATTAATGCTGATCCACGTGAAATTGTTTTCACGTCAGGTGCTACTGAATCTAATAAC CTTGCTATTAAAGGTGCTGCTAATTTCTATAATAAGAAAGGCAAGCATATTATTACCTGCAAAACTGAACATAAAGCCGT TTTAGATACGTGTCGTGAATTAGAACGTCAAGGTTTTGAAGTGACGTATCTTGATCCTGAAGAAAACGGTTTAATTGATT TAAATAAATTGAATGACGCTATGCGTGATGACACTATTTTAGTAAGTATCATGCAAGTAAATAATGAAATTGGTGTTATT CAAGACATCAGTGAAATTGGTGAAATGTGTCGTGCACGTAAAATTGTCTTCCATGTTGATGCCGCGCAAAGTGCAGGCAA AATCAACATCGACATGCAAGCATTGAAAGTTGATTTAATGTCAATTTCAGCGCATAAAATGTACGGACCTAAAGGTATTG GCGCGTTATACGTAAGCCGTAAACCACGCATTCGCTTAGAAGCACAAACACATGGTGGTGGACATGAACGTGGTATGCGT TCTGGTACCTTAGCGACACATCAAATTGTCGGTATGGGTGAAGCATGTCGATTAGCTAAAGAAGAAATGGCACAAGATCA AGCACATGTTACTGCAATGCGCGATCGTTTATGGGCCGGCTTAAATAGCATGGAACAAGTCTTTATTAACGGTGATGCGG ATAAACGTTACCCTGGTAATTTAAATGTTAGTTTCAACTTTGTTGAAGGTGAGTCACTCATCATGGCATTGAAAGATTTA GCCGTATCATCTGGTAGTGCATGTACATCAGCAAGCTTAGAGCCATCGTATGTACTTCGTGCTTTAGGTCTAAATGATGA AATGGCGCATAGCTCAATTCGCTTTAGCTTTGGTCGCTTTACTACGACAGAAGAAATTGATTACGCAATTGAACTTATTA AAGGTGCAATTGGTCACTTACGTGATATGTCACCGCTTTGGGAAATGTTCAAAGATGGTATCGATTTAGATTCAATTGAA TGGGCTGCTCACTAG Protein sequence : MKLPIYFDYSATTPVDKRVAEKMMQYMTNDGHFGNPASRSHKFGWQAEEAVDIARNQIAELINADPREIVFTSGATESNN LAIKGAANFYNKKGKHIITCKTEHKAVLDTCRELERQGFEVTYLDPEENGLIDLNKLNDAMRDDTILVSIMQVNNEIGVI QDISEIGEMCRARKIVFHVDAAQSAGKINIDMQALKVDLMSISAHKMYGPKGIGALYVSRKPRIRLEAQTHGGGHERGMR SGTLATHQIVGMGEACRLAKEEMAQDQAHVTAMRDRLWAGLNSMEQVFINGDADKRYPGNLNVSFNFVEGESLIMALKDL AVSSGSACTSASLEPSYVLRALGLNDEMAHSSIRFSFGRFTTTEEIDYAIELIKGAIGHLRDMSPLWEMFKDGIDLDSIE WAAH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAT96060.1 | cysteine desulfurase | Not tested | T-PAI | Protein | 2e-143 | 72 |
