Gene Information

Name : cysB (CPS_1200)
Accession : YP_267943.1
Strain : Colwellia psychrerythraea 34H
Genome accession: NC_003910
Putative virulence/resistance : Unknown
Product : transcriptional regulator CysB
Function : -
COG functional category : K : Transcription
COG ID : COG0583
EC number : -
Position : 1232099 - 1233073 bp
Length : 975 bp
Strand : +
Note : LysR-type transcriptional regulator; contains helix-turn-helix (HTH) motif; in Escherichia coli this protein regulates cysteine biosynthesis by controlling expression of the cys regulon; autoregulates expression; crystal structure of Klebsiella aerogenes

DNA sequence : 
ATGAAATTGCAGCAACTACGCTATATCGTTGAAGTATTAAATAACAACTTGAATGTATCCGCTACTGCAGATAGCTTGTT
TACCTCACAACCGGGCATCTCCAAACAAGTAAGAATGCTTGAAGATGAGCTAGGTATTCAAATTTTTGGTCGTAGTGGTA
AGCATCTAACTCATGTAACTGAAGCTGGCCAAGATGTGATTGATATTGCCACTCAAATACTTTCGAAAGTTGAAGGTATT
AAAGCGGTTGCTCGAGAACATACTCAGCCTGATGAAGGTAAATTACGGATTGCTACCACACATACTCAAGCTCGTTACGC
CTTACCTGATGTTATTCAGGGGTTTATCAAGAGATATAGCAAAGTCTCGTTACATATGTCTCAAGGGACTCCTGCACAAA
TTAGTGATGCGGCTGCCAAAGGTGAAGCAGATTTTGCCATAGCGACTGAATCTTTGCATTTGTATAACGATTTGGTCATG
CTCCCTTGTTACCATTGGAACCGCAGTATAATTGTTCGACCTGATCATCCATTGGCTAAAAAACAAAATATCACTATTGT
CGACATTGCTAAATATTCATTAGTCACTTATGTTTTTGGTTTTACTGGTCGTTCTGAACTCGATGCTGCTTTTGATGCTG
CTGGAGCAAAACCTAAAATAGCATTTACTGCCACAGATGCAGACGTCATAAAAACTTATGTACGTTTGGGGGTAGGTGTT
GGTGTGATTGCTTCAATGGCGATTGACGAACGTATTGATAGTGATCTTGTTGTCATTGATGCGAGTCACTTATTTAACGC
AAGTACAACTAAAATTGGTTTTAGACGCGGTAGTTTCTTACGTGCTTATATGTACGATTTCATTGAACGATTTGCACCGC
ATTTAACCAAAGACATTGTCACTCGTGCGATGTTATTGAAAAATAACCATGAAGTTGATGAATTTTTAAAAGATATTAAA
TTACCGACTCGTTAA

Protein sequence : 
MKLQQLRYIVEVLNNNLNVSATADSLFTSQPGISKQVRMLEDELGIQIFGRSGKHLTHVTEAGQDVIDIATQILSKVEGI
KAVAREHTQPDEGKLRIATTHTQARYALPDVIQGFIKRYSKVSLHMSQGTPAQISDAAAKGEADFAIATESLHLYNDLVM
LPCYHWNRSIIVRPDHPLAKKQNITIVDIAKYSLVTYVFGFTGRSELDAAFDAAGAKPKIAFTATDADVIKTYVRLGVGV
GVIASMAIDERIDSDLVVIDASHLFNASTTKIGFRRGSFLRAYMYDFIERFAPHLTKDIVTRAMLLKNNHEVDEFLKDIK
LPTR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cbl YP_853089.1 transcriptional regulator Cbl Not tested PAI IV APEC-O1 Protein 1e-59 42