Gene Information

Name : rrsD (CPS_0339)
Accession : -
Strain : Colwellia psychrerythraea 34H
Genome accession: NC_003910
Putative virulence/resistance : Unknown
Product : 16S ribosomal RNA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 350954 - 352465 bp
Length : 1512 bp
Strand : +
Note : -

DNA sequence : 
TTGAACGCTGGCGGCAGGCTTAACACATGCAAGTCGAGCGGTAACAGAGATAGCTTGCTATCTGCTGACGAGCGGCGGAC
GGGTGAGTAATGCTTGGGAATATGCCTTATGGTGGGGGACAACAGTTGGAAACGACTGCTAATACCGCATAACGTCTACG
GACCAAAGGGGGGGATCTTCGGACCTCTCGCCATTTGATTAGCCCAAGTGAGATTAGCTAGTTGGTGAGGTAATGGCTCA
CCAAGGCGACGATCTCTAGCTGGTTTGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAG
GCAGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGATGCAGCCATGCCGCGTGTGTGAAGAAGGCCTTCGGGTTGTA
AAGCACTTTCAGTTGTGAGGAAAGGAGTGTAGTTAATAGCTGCATTCTGTGACGTTAACAACAGAAGAAGCACCGGCTAA
CTTCGTGCCAGCAGCCGCGGTAATACGAGGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGTTCGTAGGCGGTC
TATTAAGCAAGATGTGAAAGCCCAGGGCTCAACCTTGGAACTGCATTTTGAACTGGTAGACTAGAGTACTGTAGAGGGTG
GTGGAATTTCCAGTGTAGCGGTGAAATGCGTAGAGATTGGAAGGAACATCAGTGGCGAAGGCGGCCACCTGGACAGATAC
TGACGCTGAGGAACGAAAGCGTGGGGAGCGAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGTCAACTAGC
CGTTTGTGGACTTGATCCGTGAGTGGCGCAGCTAACGCACTAAGTTGACCGCCTGGGGAGTACGGCCGCAAGGTTAAAAC
TCAAATGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCATCCC
TTGACATCCAGAGAAGAGACTAGAGATAGACTTGTGCCTTCGGGAACTCTGTGACAGGTGCTGCATGGCTGTCGTCAGCT
CGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCCTATCCTTATTTGCCAGCGCGTTATGGCGGGAACTC
TAAGGAGACTGCCGGTGATAAACCGGAGGAAGGTGGGGACGACGTCAAGTCATCATGGCCCTTACGGGATGGGCTACACA
CGTGCTACAATGGCAGGTACAGAGGGCAGCAATACCGCGAGGTGGAGCGAATCCCACAAAGCTTGTCGTAGTCCGGATTG
GAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGTAGATCAGAATGCTACGGTGAATACGTTCCCGGGCC
TTGTACACACCGCCCGTCACACCATGGGAGTGGGATGCAAAAGAAGTGGCTAGTTTAACCCCTCGGGGAGGACGGTCACC
ACTTTGTGTTTCATGACTGGGGTGAAGTCGTAACAAGGTAACCCTAGGGGAACCTGGGGTTGGATCACCTCC

Protein sequence : 
-

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
FTM_1695 - 16S ribosomal RNA Not tested FPI DNA e-153 89.2
FTT_r07 - 16S ribosomal RNA Not tested FPI DNA e-153 89.2
FTT_r10 - 16S ribosomal RNA Not tested FPI DNA e-153 89.2
FTM_1085 - 16S ribosomal RNA Not tested FPI DNA e-153 89.2
FTW_2069 - 16S ribosomal RNA Not tested FPI DNA e-153 89.1
FTW_2070 - 16S ribosomal RNA Not tested FPI DNA e-153 89.1