Gene Information

Name : CPS_3506 (CPS_3506)
Accession : YP_270180.1
Strain : Colwellia psychrerythraea 34H
Genome accession: NC_003910
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 3642199 - 3642915 bp
Length : 717 bp
Strand : -
Note : identified by match to protein family HMM PF00005

DNA sequence : 
ATGATCACATTAAATAATATCAGCCGCTCATTTATCGGCGATGAAGTAGAAACGGTCGCTATTGACGACATGAGCTTGAC
CATAAAAAAAGGCGAATTCTTGTCAATATTAGGACCGTCGGGCTGCGGTAAGTCAACCTTACTTAATGTACTTGGTATGT
TAGACCATATCGACCAAGGGCAGTTTACGTTTTTGAAAACCAATGTAGGCCAATCAACTGAAAGCCAGCGCGCACAATTA
AGAAAACAACATATCGGTTTTATTTTCCAGAGTTTTAATTTAATTGATGAATTAACTGTTGAGCAAAACATAGAGTTACC
GCTTTATTATCACAAAGTGGCAAAGGCTGAACGAAAACGTTTAGTTGATGAAGTATTACATCGTGTTGATATTGCTCATC
GTCGTAACCATTTACCCGCGAAATTATCAGGCGGACAGCAACAACGTGTTGCTATTGCGCGCGCTATTGTTACTCAACCA
GACCTAATTCTAGCCGACGAACCAACAGGGAATTTAGACTCAAAAAACTCGATACAGATAATGGAATTACTCCAGCAACT
AAACCAAGAAGGGTCAACCATTGTTATGGTGACTCATGCACCTGAACATGTAAATTATGGTACGCGTGTTATTGAGTTGC
TCGATGGAAATATTTGCAAGGACAATCAAATAAGCTCTCAAATTGAGCTAACTACTGCGGAGGTGTCATGTGCTTAA

Protein sequence : 
MITLNNISRSFIGDEVETVAIDDMSLTIKKGEFLSILGPSGCGKSTLLNVLGMLDHIDQGQFTFLKTNVGQSTESQRAQL
RKQHIGFIFQSFNLIDELTVEQNIELPLYYHKVAKAERKRLVDEVLHRVDIAHRRNHLPAKLSGGQQQRVAIARAIVTQP
DLILADEPTGNLDSKNSIQIMELLQQLNQEGSTIVMVTHAPEHVNYGTRVIELLDGNICKDNQISSQIELTTAEVSCA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 5e-32 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CPS_3506 YP_270180.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 1e-52 49
CPS_3506 YP_270180.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 2e-37 45
CPS_3506 YP_270180.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 2e-38 43
CPS_3506 YP_270180.1 ABC transporter ATP-binding protein NC_012469.1.7686946. Protein 2e-32 42
CPS_3506 YP_270180.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 2e-33 42