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Name : gap-3 (SPO2198) Accession : YP_167424.1 Strain : Ruegeria pomeroyi DSS-3 Genome accession: NC_003911 Putative virulence/resistance : Unknown Product : glyceraldehyde-3-phosphate dehydrogenase, type I Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0057 EC number : 1.2.1.- Position : 2338261 - 2339262 bp Length : 1002 bp Strand : + Note : identified by match to protein family HMM PF00044; match to protein family HMM PF02800; match to protein family HMM TIGR01534 DNA sequence : ATGACGATCAAGGTTGGTATCAACGGATTTGGCCGCATCGGTCGTTGCACCCTGTCCCATATCGCAGCCTCGGGCCGCGA CGATATCGAGGTGATCAAGGTCAACGCCACCGGCCCGCTGGAGACCGCCGCCCATCTGATCAAATATGACAGCGTGCATG GCCGCTTCCCGGGCGAGGTCAGCCTCGGCGAGGGCACCATGAACCTGGGCCGGGGCGACATGCAGATGTTCTCGACCTAT GACCTGAACGAGCTGGACTGGTCGGGCTGCGACGTGGTGCTGGAATGCACCGGCAAGTTCAACGATGGCGCCAAGGCCAA GGTGCATCTGGAACGCGGCGCCAAGAAGGTGCTGCTGTCCGCCCCCGGCAAGAACGTGGACAAGACCATCGTGTTCGGCG TCAACGACGACCAACTGACCGCCGCCGACACCATGATCTCGAACGGGTCCTGCACCACCAACTGCCTGGCGCCGCTGGCC AAGGTGCTGGACGAGGCATTCGGCATCGAGCACGGCATCATGACCACGATCCACGCCTATACCGGCGACCAGCCGACGCT GGACCGCCGCCACAAGGACCTGTATCGCGCCCGCGCTGCAGCGATGTCGATGATCCCCACCTCGACCGGGGCCGCCAAGG CGCTGGGTGAGGTGCTGCCGAACCTCAAGGGGCGGCTGGACGGATCGGCGATCCGGGTGCCGACGCCGAATGTCTCGGCT GTCGACCTGACCTTCCGCGCCGGGCGCGACGTGACCACGGCCGAGGTGAACGCCGCCGTTGAGGCCGCCGCCAAAGGGCC GATGAAAGGCGTGTTGGGTTACGAGCCCGCGCCGCTGGTCTCGACCGATTTCAACCACACGCCCGAAAGTTCGATCTTTG CCCCCGACCAGACCCGCGTGGTGGAAAACCGCATGGTGCGCGTGCTGGCCTGGTATGACAACGAATGGGGCTTCTCGGTG CGTATGGCCGATGTGGCAGTGGCGATGGGCCGTCTGGGCTGA Protein sequence : MTIKVGINGFGRIGRCTLSHIAASGRDDIEVIKVNATGPLETAAHLIKYDSVHGRFPGEVSLGEGTMNLGRGDMQMFSTY DLNELDWSGCDVVLECTGKFNDGAKAKVHLERGAKKVLLSAPGKNVDKTIVFGVNDDQLTAADTMISNGSCTTNCLAPLA KVLDEAFGIEHGIMTTIHAYTGDQPTLDRRHKDLYRARAAAMSMIPTSTGAAKALGEVLPNLKGRLDGSAIRVPTPNVSA VDLTFRAGRDVTTAEVNAAVEAAAKGPMKGVLGYEPAPLVSTDFNHTPESSIFAPDQTRVVENRMVRVLAWYDNEWGFSV RMADVAVAMGRLG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| epd | AAO17215.1 | Epd | Not tested | tcd island | Protein | 3e-68 | 46 |
