|
Name : glcB (SPO2839) Accession : YP_168047.1 Strain : Ruegeria pomeroyi DSS-3 Genome accession: NC_003911 Putative virulence/resistance : Unknown Product : malate synthase G Function : - COG functional category : C : Energy production and conversion COG ID : COG2225 EC number : 2.3.3.9 Position : 3035758 - 3037905 bp Length : 2148 bp Strand : - Note : catalyzes the formation of malate from glyoxylate and acetyl-CoA DNA sequence : ATGAGCGGCAGAGTGGAACGGAACGGGCTGGAAATCGCTGGGGAACTGGCGGCGTTTGTGGAAACGCGTGCTTTGCCCGG CACCGGGGTAGAACCGGACGCGTTCTGGGCCGGGATGGCGCGGATGGTGGCCGAACTGGGGCCGAAGAACCGCGCGCTGC TGGATCGGCGCGCGGCGCTTCAGGCGCAGATCGACGCCTGGCATGTCGCCCATCGCGACAAGCCGCATGATCACGAGGCC TACAAGACCTTCCTGGCCGAGATCGGCTATCTGCTGCCCGAAGGTGCGGCCTTCGAGATCGAAACGGCAAATACCGACCC CGAAATCGCCTCGGTGCCGGGGCCGCAGCTGGTGGTGCCGATCACCAATGCCCGTTATGCGCTGAACGCCGCCAATGCCC GCTGGGGCAGCCTGTATGACGCGCTCTATGGCACCGATGCCATGGCGGGGCCGGTGCCAGCGGGCGGATATGACCGGGGC CGGGGCGCCCGGGTGGTGGCGCGGGCCCGGGTGTTCCTGGACGAGGCGTTCCCGGTGCAGGGCGTCAGCCATGCCGATGC CCGCCGCTATCACATCCGCGACGGCGCGCTGCTGGTCGATGGTCAGCCGCTGATCGACCCGTCGAAATTCGCGGGCTATC GCGGCCATCCCAAGGCCCCCGACGCGGTGCTGCTGCGCAACAACGGGTTGCATGTGGAGCTGGTGTTCGACCGCACCCAT CCGGTGGGCTGCCACGATCAGGCCGGGCTGGCCGACGTGAGGCTGGAAAGCGCGATATCGGCGATCATGGATTGCGAGGA TTCGGTCGCCTGTGTCGATGCCGAGGACAAGGTGCAGGCCTATTCCAACTGGTTGGGCCTGATGCGCGGCGATCTGAGCG AGGAGGTGACCAAGGGCGGTGCCACCTTTACCCGCGCGCTGGCCGGCGATCTGGATTATCTGGCTCCCGACGGCAGCGCG ATGAGCGTCAAGGGCCGGGCGCTGATGCTGGTGCGCAATGTCGGCCACCTGATGACCAACCCGGCGGTGCTGGATGCTGA TGGGGCCGAGATCTACGAGGGGCTGATGGACGCGCTGGTCACCGTTGCCATCGCGATGCATGACCTGAAACGCGCGGGCG GCAATTCGCTCACCGGTTCGGTCTATGTGGTCAAGCCCAAGATGCACGGCCCCGAAGAGGTCGCCTTTGCCGTCGAGACC TTTGACATGGTCGAGGATATCCTCGGCCTGCCGCGCAATACGGTCAAGATCGGCATCATGGACGAGGAGCGGCGCACCAG CGTCAATCTCAAGGAATGTATCCGCGCCGCGAAATCGCGGGTCTGTTTCATCAACACCGGGTTCCTCGACCGGACCGGCG ACGAGATCCATACCTCGATGGAGGCGGGGCCGTTCAGCCGCAAGGATTTCATCAAACGCAAATCCTGGATCACCGCTTAT GAGAACCTGAATGTCGATATCGGCCTGGACTGCGGGCTGTCGGGCAAGGCCCAGATCGGCAAGGGCATGTGGGCGATGCC CGACCGGATGGCCGCGATGATCGAGACCAAGATCGAACATCCCAAGGCGGGCGCCAATTGCGCCTGGGTGCCCAGCCCGA CGGCGGCCACCCTGCATGCGCTGCATTATCACAAGGTCGATGTCTTTGCGGTGCAAGGGGCGCTCAAGTCCGGCGGGCGG CGGGCGCATGTGGACGGGATTCTGGAGATTCCGCTGGCCAGCTTCCGCAAATGGTCATCCGAGCAGATCCGGCGTGAGGT GGAAAACAACGCGCAGGGCATCCTGGGCTATGTGGTGCGCTGGGTCGATCAGGGGGTGGGCTGCTCGAAAGTGCCCGATA TCAACGATGTGGGCCTGATGGAAGACCGCGCCACCTGCCGGATCTCGGCCCAGCATATCGCCAACTGGCTACATCACGAT GTGGTGGATGCCCAGGAGGTGATGGCCGCGATGCGCAAGATGGCGGCGGTGGTCGATGAGCAGAACGCGGGCGATCCGGC CTATCATCCGATGGCGCCCGGGTTTGACGGGATTGCCTTTCAGGCGGCCTGCGATCTGGTGTTCAAGGGGCGGGTGCAGC CTTCGGGCTATACTGAGCCGGTGCTGCATGCCCGCCGGCTGGAGCTGAAAGCCAGCCTTGGTGCGTGA Protein sequence : MSGRVERNGLEIAGELAAFVETRALPGTGVEPDAFWAGMARMVAELGPKNRALLDRRAALQAQIDAWHVAHRDKPHDHEA YKTFLAEIGYLLPEGAAFEIETANTDPEIASVPGPQLVVPITNARYALNAANARWGSLYDALYGTDAMAGPVPAGGYDRG RGARVVARARVFLDEAFPVQGVSHADARRYHIRDGALLVDGQPLIDPSKFAGYRGHPKAPDAVLLRNNGLHVELVFDRTH PVGCHDQAGLADVRLESAISAIMDCEDSVACVDAEDKVQAYSNWLGLMRGDLSEEVTKGGATFTRALAGDLDYLAPDGSA MSVKGRALMLVRNVGHLMTNPAVLDADGAEIYEGLMDALVTVAIAMHDLKRAGGNSLTGSVYVVKPKMHGPEEVAFAVET FDMVEDILGLPRNTVKIGIMDEERRTSVNLKECIRAAKSRVCFINTGFLDRTGDEIHTSMEAGPFSRKDFIKRKSWITAY ENLNVDIGLDCGLSGKAQIGKGMWAMPDRMAAMIETKIEHPKAGANCAWVPSPTAATLHALHYHKVDVFAVQGALKSGGR RAHVDGILEIPLASFRKWSSEQIRREVENNAQGILGYVVRWVDQGVGCSKVPDINDVGLMEDRATCRISAQHIANWLHHD VVDAQEVMAAMRKMAAVVDEQNAGDPAYHPMAPGFDGIAFQAACDLVFKGRVQPSGYTEPVLHARRLELKASLGA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcB | CAE85241.1 | GlcB protein, malate synthase G | Not tested | PAI V 536 | Protein | 5e-166 | 54 |
