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Name : rnhA (SPO3212) Accession : YP_168415.1 Strain : Ruegeria pomeroyi DSS-3 Genome accession: NC_003911 Putative virulence/resistance : Unknown Product : ribonuclease H Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0328 EC number : - Position : 3421234 - 3421701 bp Length : 468 bp Strand : + Note : An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids DNA sequence : ATGCCTGAGCTGTTTGCCTATACCGACGGCGCCTGTTCCGGCAATCCCGGCCCCGGCGGCTGGGGCGTGCTGTTGCGCGC CATCGAGGGCGAGACCGTGCTGAAGGAACGCGAGCTGTGCGGTGGCGAGGCTGAGACCACCAACAACCGGATGGAACTCT TGGCTGCGATCAACGCGCTGGAAACGCTGGAGCGGCCCTCGAAAATCACCGTGGTCACCGACAGCGCCTATGTAAAGAAC GGTGTGACCGGCTGGATATTCGGCTGGAAGCGCAACGGCTGGAAGACCGCCGGCAAGAAACCGGTCAAGAATGTCGAACT GTGGCAGCGTCTTGACTTGGCGCAGGCACGCCATGACGTGACCTGGAAGTGGGTCAAGGGCCATGCGGGACATCCCGAGA ACGAACGCGCCGACGAGTTGGCGCGTGCAGGCATGAAACCCTTCAAGCCGAAAAAGGCCCGCGCGTGA Protein sequence : MPELFAYTDGACSGNPGPGGWGVLLRAIEGETVLKERELCGGEAETTNNRMELLAAINALETLERPSKITVVTDSAYVKN GVTGWIFGWKRNGWKTAGKKPVKNVELWQRLDLAQARHDVTWKWVKGHAGHPENERADELARAGMKPFKPKKARA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rnhA | AAO17224.1 | RnhA | Not tested | tcd island | Protein | 7e-36 | 61 |
