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Name : glcF (SPO3480) Accession : YP_168676.1 Strain : Ruegeria pomeroyi DSS-3 Genome accession: NC_003911 Putative virulence/resistance : Unknown Product : glycolate oxidase, iron-sulfur subunit Function : - COG functional category : C : Energy production and conversion COG ID : COG0247 EC number : - Position : 3684628 - 3685950 bp Length : 1323 bp Strand : + Note : identified by similarity to SP:P52074; match to protein family HMM PF00037; match to protein family HMM PF02754 DNA sequence : ATGCAGACGAATTTCACCGCCGAACAGCTGACCGATCCCGGTATCCAGCGCGCCAACGAGATCCTGCGCTCTTGTGTGCA TTGCGGGTTCTGTACCGCCACCTGCCCAACCTATCAGGTGCTGGGCGACGAGCTCGACAGCCCGCGCGGGCGCATCTACC TGATCAAGGACATGCTGGAAAACAGCCGGATTCCCGACGCCAAAACGGTCAAGCATATCGACCGTTGCCTCAGCTGTCTG GCCTGCATGACCACCTGCCCCTCGGGCGTGCATTACATGCATCTGGTCGATCACGCGCGCGAGTATATCGAGCAGAATTA TCGCCGCCCGTTCAGCGACCGCGCGCTACGCTGGATCCTGTCGCGTATCCTGCCCTATCCCACGCGGTTCCGGCTCGCTT TGCTGGGCGCCAAGATCGGCCGCCCGTTCCGCGGGTTGCTGCCCGATGCGCGGCTGCGCGCGATGCTCGACATGGCGCCG AAACATATCCCACCCGTCAGCCGCAACGACGATCCGCAGAGCTTTGCACCGGCTGGCGCGCGCAAGAAACGCGTCGCCCT GATGACCGGCTGCGCGCAAAAAGCGCTGAACACCGATATCAACGACGCCACCATTCGCCTGCTGACCCGGCTGGGTTGCG AGGTCGTGGTGGCCGAGGGGGCGGGATGCTGCGGAGCGCTGACCCATCACATGGGGCGAACCGATGAAAGCCACGCGACG GCGGCCAAAAACATTCGCGCCTGGGTGCGCGAGATGGATGGCGCCGGGCTGGACGCGATCGTGATCAATACCAGCGGCTG CGGCACCACCGTCAAGGATTACGGCCACATGTTCCGCAACGAGCCGCTGGCAGACGAGGCCGCCCGCGTGTCGTCCATCG CGATGGACATAAGCGAGCTGTTGATTAAGCTCGACCTGCCCGAAGGCACCGACAAGGGGCTGACCGTGGCCTATCACGCC GCCTGCTCGCTGCAACACGGGCAAAAGATCAAGACCTATCCCAAGGACCTGCTGAAACGCGCGGGGTTCAAGGTGGTCGA ACCTGCCGACAGCCATCTATGCTGCGGCTCGGCCGGGACCTATAACCTGATGCAGCCCGAGATCTCGGGCAAACTCAAGG CGCGCAAGATCCGCACGCTTGAGGCCAAGAAACCCGACCTGATCGCGGCAGGCAATATCGGCTGTATGATGCAGATCGGG TCAGGCACCGAACTGCCGATCATGCACACGGTGGAACTGTTGGATTGGGCCACGGGCGGACCGCAGCCACCGGCGATGAC CGCGCCAGGCAAGCGCGCGCCCGAGGTGCCGATCCTGCGTTAA Protein sequence : MQTNFTAEQLTDPGIQRANEILRSCVHCGFCTATCPTYQVLGDELDSPRGRIYLIKDMLENSRIPDAKTVKHIDRCLSCL ACMTTCPSGVHYMHLVDHAREYIEQNYRRPFSDRALRWILSRILPYPTRFRLALLGAKIGRPFRGLLPDARLRAMLDMAP KHIPPVSRNDDPQSFAPAGARKKRVALMTGCAQKALNTDINDATIRLLTRLGCEVVVAEGAGCCGALTHHMGRTDESHAT AAKNIRAWVREMDGAGLDAIVINTSGCGTTVKDYGHMFRNEPLADEAARVSSIAMDISELLIKLDLPEGTDKGLTVAYHA ACSLQHGQKIKTYPKDLLKRAGFKVVEPADSHLCCGSAGTYNLMQPEISGKLKARKIRTLEAKKPDLIAAGNIGCMMQIG SGTELPIMHTVELLDWATGGPQPPAMTAPGKRAPEVPILR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcF | CAE85243.1 | GlcF protein | Not tested | PAI V 536 | Protein | 3e-81 | 44 |
