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Name : cycK (XAC2328) Accession : NP_642645.1 Strain : Xanthomonas axonopodis 306 Genome accession: NC_003919 Putative virulence/resistance : Unknown Product : C-type cytochrome biogenesis membrane protein Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 2720712 - 2722649 bp Length : 1938 bp Strand : + Note : - DNA sequence : ATGCTTCCTGAACTCGGGACGTTGCTGCTGGTGCTGGCCCTGCTGGTGGCGCTGGTGCAGGCCGTGGTGCCGCTGGCCGG CGCACAGCGCGGACGCAGCAGCTGGATGGCCGTGGCGCGACCGGCGGCGCTGGTGCAGCTGGCACTGATCGCATCGGCCT TCGCCGTGTTGACGCACGCCTTCTTGGTGCAGGATTTTTCGGTGCGCTACGTCGCCGAGAATTCCAACAGCCTGCTGCCG GTGATGTACCGCTATTCGGCAGTGTGGGGTGCGCACGAAGGCTCGCTGCTGCTGTGGACGCTGGTGCTGGGGTTGTGGAC CGGCGCGGTGGCGATCTGGTCGCGGCAGCTGCCGGCGCATGTGATCGCGCGCGTGCTCGGCGTCATGGCGCTGGTCAGCA TCGGGTTTCTGGCGTTCTTGCTGTTCACCTCCAACCCGTTTGCGCGGTTGTTTCCGGTGCCGCTGGAGGGTGGCGACCTC AATCCGCTGCTGCAGGATCCGGGGCTGATCGTCCATCCGCCGATGCTGTATTGCGGCTACGTCGGCTTTGCGGTGCCGTT CGCATTCGCCATCGCCGCACTGCTGGAAGGCCGCATGGACGCGTGCTGGCTGCGCTGGACGCGGCCGTGGACCAATGTCG CCTGGTCGATGCTCACCGTCGGCATCGCGCTCGGTAGCTGGTGGGCGTATTACGAGCTGGGCTGGGGTGGCTGGTGGTTC TGGGACCCGGTGGAGAACGCCAGTTTCATGCCGTGGCTGGTGGGCACCGCACTGTTGCATTCGCAGGCGGTGACCGAAAA GCGCGGCAGCTTCGCCAGCTGGACCTTGTTGCTGGCGATCGCCGCCTTTGCGCTGTCGCTGCTGGGCACGTTTCTGGTGC GCTCGGGCGTGCTGACCAGCGTGCATTCGTTCGCCGCCGACCCGTCGCGCGGACTGTTCATTCTGGTATTCCTGCTGGCC GTGGTCGGTGGTTCGTTGCTGCTGTATGCGCTGCGCGCGCCGCTTCTGTCGGTGGCGGACGATCCGCGTCGCGCATTCGC CGGCAGTTCGCGCGAAACCTTGTTGCTGTTGAACAACCTGCTGCTCACCTGCGCCTGCGCAATGGTGTTGCTGGGCACCT TGTATCCGCTGCTCGCCGATGCCTTGGGGCTGGGCAAGCTGTCGGTTGGCCCGCCCTACTTCGGCACCTTGTTCGTGGTG TTGATGGCGCCGCTGGTGGCACTGCTGCCCTTCGGCCCGCTCACCCGCTGGCAGCGCGAACAGGCCTCGCGGCCGGTGGC GCTGCTGGCGCCGTGGGCAGCCCTGGCGTTGGCTGCCGGCGTGCTGGCCTGGTTCGCCGCGCCGCAGGGGCAGTTGAAAG CCGCCTTCGGTGTCGCCGGTGCAGCCTGGGTGTTGCTGGGCACCGCGCGGTTCCTGTGGACGCGGCGGGCGGCCAAGGGG CGCAAATTCACCGCCGAGATGCTGGGCATGGTGCTGGCGCACCTGGGCGTTGCGGTGTTCCTGTCCGGTGCCATGCTGGT GGAGGGATTGAGCCTGCAGCGCGAAGTGGCGCTGGCGCCCGGGCAACAGGTGCAGATCGGCCGCTATGCACTGCATTTCG ACGGGCTGGAAGAGCTGCGCGGGCCCAATTACGTGTCCGACCGTGCCAACCTGCAGGTGTTCAAGGACGATGCGCCGGCG GGCATGCTGCATGCGGAAAAGCGCCGCTACGCCAGTGGCGGCCAGACGTTGACCGAGGCGGCGATCCGCCCTGGCCCGTT TGGCGACCTGTATGTCGCCCTTGGCGAACCGCTGGGCAACCAGGCCTGGGCGGTACGTGTCCACCTCAAACCGTTCGTCC GCTGGATCTGGCTGGGAGCGCTGCTGATGGCGCTCGGCGGCCTGGTGACCGCGGCCGACCGGCGTTTTCGTCGTTCTCCG GAGATCCAAGATGGTTGA Protein sequence : MLPELGTLLLVLALLVALVQAVVPLAGAQRGRSSWMAVARPAALVQLALIASAFAVLTHAFLVQDFSVRYVAENSNSLLP VMYRYSAVWGAHEGSLLLWTLVLGLWTGAVAIWSRQLPAHVIARVLGVMALVSIGFLAFLLFTSNPFARLFPVPLEGGDL NPLLQDPGLIVHPPMLYCGYVGFAVPFAFAIAALLEGRMDACWLRWTRPWTNVAWSMLTVGIALGSWWAYYELGWGGWWF WDPVENASFMPWLVGTALLHSQAVTEKRGSFASWTLLLAIAAFALSLLGTFLVRSGVLTSVHSFAADPSRGLFILVFLLA VVGGSLLLYALRAPLLSVADDPRRAFAGSSRETLLLLNNLLLTCACAMVLLGTLYPLLADALGLGKLSVGPPYFGTLFVV LMAPLVALLPFGPLTRWQREQASRPVALLAPWAALALAAGVLAWFAAPQGQLKAAFGVAGAAWVLLGTARFLWTRRAAKG RKFTAEMLGMVLAHLGVAVFLSGAMLVEGLSLQREVALAPGQQVQIGRYALHFDGLEELRGPNYVSDRANLQVFKDDAPA GMLHAEKRRYASGGQTLTEAAIRPGPFGDLYVALGEPLGNQAWAVRVHLKPFVRWIWLGALLMALGGLVTAADRRFRRSP EIQDG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 1e-116 | 56 |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 1e-102 | 55 |
