Gene Information

Name : ccmA (PFL_1680)
Accession : YP_258806.1
Strain : Pseudomonas protegens Pf-5
Genome accession: NC_004129
Putative virulence/resistance : Unknown
Product : cytochrome c biogenesis protein CcmA
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG4133
EC number : -
Position : 1883173 - 1883808 bp
Length : 636 bp
Strand : +
Note : identified by match to protein family HMM PF00005; match to protein family HMM TIGR01189

DNA sequence :
TTGACCAGCCCTCTTCTCGAAGCCGTAGCACTCGCCTGTGAGCGCGATTGGCGGATGCTATTTGAACACCTCGAGTTGCG
TCTGACGGGCGGCGACATGGTGCAGATCAGCGGCCCCAACGGCAGCGGCAAGACCAGCCTGCTACGCCTGCTGGCCGGGT
TGATGCAGCCCACCAGCGGCCAGGTGCTGCTCAATGGCCAGCCATTGCACGCCCAGCGCGCGGAACTGGCCCGCAACCTG
TTGTGGATCGGCCATGCCGCCGGCATCAAGGAGCTGTTGAGCCCCGAGGAGAACCTCAGCTGGCTCTGTGCCCTGCACCA
GCCTGCCCGGCGCGAGGCGATCTGGCAGGCCCTGGCGGCGGTCGGCCTGCGCGGTTTCGAGGATGTGCCTTGCCATACCC
TTTCCGCCGGCCAGCAGCGCCGCGTGGCCTTGGCGCGCCTGTACCTGGACAGCCCGCCGTTGTGGATACTCGACGAACCC
TTCACCGCCCTCGACAAGCAGGGCGTGGCCCAGCTCGAAGAGCACCTGGCGGGCCATTGCGAGCGTGGCGGCATGGTGGT
CCTGACCACCCACCACAGCCTGGCCCGCATGCCTTCCGGCTACCGTGACATTGACCTGGGACGGTGGGCCGCATGA

Protein sequence :
MTSPLLEAVALACERDWRMLFEHLELRLTGGDMVQISGPNGSGKTSLLRLLAGLMQPTSGQVLLNGQPLHAQRAELARNL
LWIGHAAGIKELLSPEENLSWLCALHQPARREAIWQALAAVGLRGFEDVPCHTLSAGQQRRVALARLYLDSPPLWILDEP
FTALDKQGVAQLEEHLAGHCERGGMVVLTTHHSLARMPSGYRDIDLGRWAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ccmA AAN62111.1 putative heme exporter protein A Not tested PAGI-2(C) Protein 4e-26 48