Name : ccmA (PFL_1680) Accession : YP_258806.1 Strain : Pseudomonas protegens Pf-5 Genome accession: NC_004129 Putative virulence/resistance : Unknown Product : cytochrome c biogenesis protein CcmA Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG4133 EC number : - Position : 1883173 - 1883808 bp Length : 636 bp Strand : + Note : identified by match to protein family HMM PF00005; match to protein family HMM TIGR01189 DNA sequence : TTGACCAGCCCTCTTCTCGAAGCCGTAGCACTCGCCTGTGAGCGCGATTGGCGGATGCTATTTGAACACCTCGAGTTGCG TCTGACGGGCGGCGACATGGTGCAGATCAGCGGCCCCAACGGCAGCGGCAAGACCAGCCTGCTACGCCTGCTGGCCGGGT TGATGCAGCCCACCAGCGGCCAGGTGCTGCTCAATGGCCAGCCATTGCACGCCCAGCGCGCGGAACTGGCCCGCAACCTG TTGTGGATCGGCCATGCCGCCGGCATCAAGGAGCTGTTGAGCCCCGAGGAGAACCTCAGCTGGCTCTGTGCCCTGCACCA GCCTGCCCGGCGCGAGGCGATCTGGCAGGCCCTGGCGGCGGTCGGCCTGCGCGGTTTCGAGGATGTGCCTTGCCATACCC TTTCCGCCGGCCAGCAGCGCCGCGTGGCCTTGGCGCGCCTGTACCTGGACAGCCCGCCGTTGTGGATACTCGACGAACCC TTCACCGCCCTCGACAAGCAGGGCGTGGCCCAGCTCGAAGAGCACCTGGCGGGCCATTGCGAGCGTGGCGGCATGGTGGT CCTGACCACCCACCACAGCCTGGCCCGCATGCCTTCCGGCTACCGTGACATTGACCTGGGACGGTGGGCCGCATGA Protein sequence : MTSPLLEAVALACERDWRMLFEHLELRLTGGDMVQISGPNGSGKTSLLRLLAGLMQPTSGQVLLNGQPLHAQRAELARNL LWIGHAAGIKELLSPEENLSWLCALHQPARREAIWQALAAVGLRGFEDVPCHTLSAGQQRRVALARLYLDSPPLWILDEP FTALDKQGVAQLEEHLAGHCERGGMVVLTTHHSLARMPSGYRDIDLGRWAA |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
ccmA | AAN62111.1 | putative heme exporter protein A | Not tested | PAGI-2(C) | Protein | 4e-26 | 48 |