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Name : ccmE (PFL_1684) Accession : YP_258810.1 Strain : Pseudomonas protegens Pf-5 Genome accession: NC_004129 Putative virulence/resistance : Unknown Product : cytochrome c-type biogenesis protein CcmE Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG2332 EC number : - Position : 1885489 - 1885944 bp Length : 456 bp Strand : + Note : identified by similarity to SP:P33928; match to protein family HMM PF03100 DNA sequence : GTGAATCCGCTGCGTAAAAAGCGTCTTTTGATCATCCTGGCGATTCTGGTCGGTGTCGGCATTGCCGTTGGCCTGGCCCT CAGCGCGCTGAAGGAAAACATCAACCTGTTCTACACCCCGACCCAGATCGCCAATGGCGAAGCACCGCTGGACACGCGGA TCCGCGCCGGCGGCATGGTCCAGGCCGGTTCCCTGCAGCGTTCCGCCGACTCCCTGGACGTGAAATTCGTGGTCACCGAC TTCAACAAGTCGGTGACCATCACCTACCGCGGCATCCTTCCGGACCTGTTCCGCGAAGGGCAGGGCATCGTTGCCCTGGG CAAGCTCAACGCCGATGGCGTGGTGGTGGCCGATGAAGTGCTGGCCAAGCACGACGAGAAGTACATGCCGCCGGAAGTCA CCAAGGCCCTGAAAGACAGCGGCCAGTCGGCACCGACACCAGCGAAAGAGGGTTAA Protein sequence : MNPLRKKRLLIILAILVGVGIAVGLALSALKENINLFYTPTQIANGEAPLDTRIRAGGMVQAGSLQRSADSLDVKFVVTD FNKSVTITYRGILPDLFREGQGIVALGKLNADGVVVADEVLAKHDEKYMPPEVTKALKDSGQSAPTPAKEG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cycJ / ccmE | AAN62107.1 | putative cytochrome C-type biogenesis protein CycJ | Not tested | PAGI-2(C) | Protein | 8e-28 | 53 |
| ccmE | YP_217242.1 | cytochrome c-type biogenesis protein CcmE | Not tested | SPI-12 | Protein | 6e-25 | 49 |
