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Name : glcF (PFL_2267) Accession : YP_259374.1 Strain : Pseudomonas protegens Pf-5 Genome accession: NC_004129 Putative virulence/resistance : Unknown Product : glycolate oxidase iron-sulfur subunit Function : - COG functional category : C : Energy production and conversion COG ID : COG0247 EC number : - Position : 2527775 - 2528992 bp Length : 1218 bp Strand : - Note : identified by similarity to SP:P52074; match to protein family HMM PF00037; match to protein family HMM PF02754 DNA sequence : ATGCAGACCACCCTCAGCCCCGAGGCCCGGCAACTGCCCCGGGCCGCCGAAGCCGAGCGCATCCTGCGCAGTTGCGTGCA TTGCGGCTTCTGCAACGCCACCTGCCCCACCTACCAGTTGCAGGGCGACGAGCTGGACGGCCCGCGGGGGCGCATCTACC TGATCAAGCAGGTGCTCGAAGGCGCCCCGGCCACCGCCCATGCGCAGCAGCACCTGGACCGCTGCCTGTCGTGCCGCAAC TGCGAAAGCACCTGCCCTTCCGGGGTCGACTACCACAACCTGCTGGACATCGGCCGCGCCGCGGTGGATGCCGCCCTGCC CCGGCCCGCCGGCCAGCAATTGTTGCGCCGCGGCCTGCGGGCGCTGAGCGCCAACCCGCAGCTGTTCAAGGCCCTGATCC ATGGCGGTAGCCGCCTGCGCCCGCTATTGCCCCAGGCCCTGCAGGACAAGCTGCCGCGCCAGGTGCCCAGCGCCAAACCG CGTCCGCCCATGCGCCATGCACGGCGCGTGCTGCTGCTCGAAGGCTGCGTGCAGCCGGGGCTGTCACCCAATACCAACGC CGCCGCAGCGCGGGTCCTGGATCGCCTGGGCATCAGCGTGCAACCGGTCAGCGAGGCCGGCTGCTGCGGCGCGGTGGACT ATCACCTGGATGCCCAGCAAGCCGGTCTGCAGCGCGCCCGGCGCAATATCGACGCCTGGTGGCCGCACCTGCAACTGGGG GCCGAAGCCATCGTCCAGACCGCCAGCGGCTGCGGCGCCTTCATCAAGGATTACCAGCACCTGCTGGCCCATGACCCGGC CTACCGCAGCAAGGCCCAGCGCGTCAGTGCCCTGGCCCGGGACCTGGTGGAAGTGCTGCGGGATGAACCCCTGGAACAGC TCGGCGCCCACACCGGCCAGCGCCTGGCCTTCCACTGCCCCTGCACCCTGCAGCACGCGCAGAAGCTCGGCGGCGCCGTG GAAAGCCTGCTGCAACGCCTGGGTTTTCACCTCACCGCGGTGCCCGACAGCCACCTGTGCTGCGGTTCGGCGGGCACCTA TTCGCTGACCCAGCCGACGCTGGCGCGACAACTGCGGGACGACAAGCTGCGGGCCCTGGAAAGCGGCCAGCCGGACCTCA TTGCCACCGCCAACATCGGCTGCCAGAGCCACCTCGACGGCGCCGGCCGGACCCCGGTACGGCACTGGATCGAAGTGCTG GAAGCCGCCCTGCCCTGA Protein sequence : MQTTLSPEARQLPRAAEAERILRSCVHCGFCNATCPTYQLQGDELDGPRGRIYLIKQVLEGAPATAHAQQHLDRCLSCRN CESTCPSGVDYHNLLDIGRAAVDAALPRPAGQQLLRRGLRALSANPQLFKALIHGGSRLRPLLPQALQDKLPRQVPSAKP RPPMRHARRVLLLEGCVQPGLSPNTNAAAARVLDRLGISVQPVSEAGCCGAVDYHLDAQQAGLQRARRNIDAWWPHLQLG AEAIVQTASGCGAFIKDYQHLLAHDPAYRSKAQRVSALARDLVEVLRDEPLEQLGAHTGQRLAFHCPCTLQHAQKLGGAV ESLLQRLGFHLTAVPDSHLCCGSAGTYSLTQPTLARQLRDDKLRALESGQPDLIATANIGCQSHLDGAGRTPVRHWIEVL EAALP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcF | CAE85243.1 | GlcF protein | Not tested | PAI V 536 | Protein | 1e-137 | 69 |
