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Name : PFL_2291 (PFL_2291) Accession : YP_259398.1 Strain : Pseudomonas protegens Pf-5 Genome accession: NC_004129 Putative virulence/resistance : Virulence Product : RNA polymerase sigma factor, FecI family Function : - COG functional category : K : Transcription COG ID : COG1595 EC number : - Position : 2551927 - 2552448 bp Length : 522 bp Strand : + Note : identified by similarity to SP:P23484; match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937 DNA sequence : ATGCCCGCCGACGACTTATCCCTGCGCTGTGCCGTCACCGACCTCTACACCCATCACCATGGCTGGCTGCAGGGCTGGTT GCGCCAGCGCCTGGGCAACGCCTTCGATGCCGCCGACCTGGCCCAGGACACCTTCGTGCGGGTGCTCAAGGCGCGCAACG CAGTGGAGATCCGTGAGCCGCGGCCCTACCTGTCGCGCATTGCCCGGGGCCTGCTGATCGATCTGTTTCGCCGACGTTCC CTGGAGCAGGCCTACCTCGAAGCCCTGGCCCTGGTACCCGAGGGCGAGCATCCGTCGCCGGAGGAGCAGAGCGTGCTGTT CCAGGCGCTGATGGAAGTCGACCGGCTGCTGGATGGCCTGGGGCCCAAGGTGAAACAGGCTTTCCTGCTGTCCCAGTGCG ACGGCCTGACCTACGAGCAGATCGCCGAGCGCCTGCAGATTTCCGTGCGCAGCGTGAGCAACTACATGGCCAAGGCCATG GAGCATTGCTGCCTGATGCAGATGCGGATGCAGCTGTCATGA Protein sequence : MPADDLSLRCAVTDLYTHHHGWLQGWLRQRLGNAFDAADLAQDTFVRVLKARNAVEIREPRPYLSRIARGLLIDLFRRRS LEQAYLEALALVPEGEHPSPEEQSVLFQALMEVDRLLDGLGPKVKQAFLLSQCDGLTYEQIAERLQISVRSVSNYMAKAM EHCCLMQMRMQLS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAL08458.1 | FecI | Virulence | SRL | Protein | 6e-40 | 54 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PFL_2291 | YP_259398.1 | RNA polymerase sigma factor, FecI family | VFG1049 | Protein | 2e-40 | 54 |
